Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
H2afb1Q9CQ70 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
H2afb1Q9CQ70 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC22.59■■□□□ 1.21
H2afb1Q9CQ70 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC22.56■■□□□ 1.2
H2afb1Q9CQ70 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
H2afb1Q9CQ70 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC22.45■■□□□ 1.18
H2afb1Q9CQ70 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC22.39■■□□□ 1.17
H2afb1Q9CQ70 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC22.38■■□□□ 1.17
H2afb1Q9CQ70 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
H2afb1Q9CQ70 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
H2afb1Q9CQ70 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
H2afb1Q9CQ70 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC22.35■■□□□ 1.17
H2afb1Q9CQ70 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
H2afb1Q9CQ70 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
H2afb1Q9CQ70 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC22.29■■□□□ 1.16
H2afb1Q9CQ70 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
H2afb1Q9CQ70 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
H2afb1Q9CQ70 Rab21-202ENSMUST00000218831 843 ntBASIC22.26■■□□□ 1.15
H2afb1Q9CQ70 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
H2afb1Q9CQ70 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
H2afb1Q9CQ70 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
H2afb1Q9CQ70 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
H2afb1Q9CQ70 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
H2afb1Q9CQ70 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
H2afb1Q9CQ70 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
H2afb1Q9CQ70 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
H2afb1Q9CQ70 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
H2afb1Q9CQ70 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
H2afb1Q9CQ70 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC22.11■■□□□ 1.13
H2afb1Q9CQ70 Zfp131-207ENSMUST00000224946 1783 ntBASIC22.11■■□□□ 1.13
H2afb1Q9CQ70 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
H2afb1Q9CQ70 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
H2afb1Q9CQ70 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC22.08■■□□□ 1.13
H2afb1Q9CQ70 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
H2afb1Q9CQ70 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC22.05■■□□□ 1.12
H2afb1Q9CQ70 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC22.04■■□□□ 1.12
H2afb1Q9CQ70 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
H2afb1Q9CQ70 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC22.04■■□□□ 1.12
H2afb1Q9CQ70 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
H2afb1Q9CQ70 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
H2afb1Q9CQ70 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
H2afb1Q9CQ70 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC22■■□□□ 1.11
H2afb1Q9CQ70 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
H2afb1Q9CQ70 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
H2afb1Q9CQ70 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
H2afb1Q9CQ70 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
H2afb1Q9CQ70 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC21.91■■□□□ 1.1
H2afb1Q9CQ70 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
H2afb1Q9CQ70 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
H2afb1Q9CQ70 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
H2afb1Q9CQ70 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
H2afb1Q9CQ70 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
H2afb1Q9CQ70 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
H2afb1Q9CQ70 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
H2afb1Q9CQ70 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC21.85■■□□□ 1.09
H2afb1Q9CQ70 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
H2afb1Q9CQ70 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
H2afb1Q9CQ70 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
H2afb1Q9CQ70 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
H2afb1Q9CQ70 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
H2afb1Q9CQ70 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
H2afb1Q9CQ70 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
H2afb1Q9CQ70 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
H2afb1Q9CQ70 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
H2afb1Q9CQ70 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
H2afb1Q9CQ70 Gm2415-204ENSMUST00000190235 2004 ntBASIC21.72■■□□□ 1.07
H2afb1Q9CQ70 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
H2afb1Q9CQ70 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
H2afb1Q9CQ70 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
H2afb1Q9CQ70 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
H2afb1Q9CQ70 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
H2afb1Q9CQ70 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
H2afb1Q9CQ70 Gm25262-201ENSMUST00000174934 133 ntBASIC21.68■■□□□ 1.06
H2afb1Q9CQ70 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
H2afb1Q9CQ70 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
H2afb1Q9CQ70 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
H2afb1Q9CQ70 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
H2afb1Q9CQ70 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
H2afb1Q9CQ70 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
H2afb1Q9CQ70 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC21.57■■□□□ 1.04
H2afb1Q9CQ70 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
H2afb1Q9CQ70 AL845457.1-201ENSMUST00000197244 68 ntBASIC21.57■■□□□ 1.04
H2afb1Q9CQ70 Gm6658-202ENSMUST00000209493 1885 ntBASIC21.57■■□□□ 1.04
H2afb1Q9CQ70 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
H2afb1Q9CQ70 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
H2afb1Q9CQ70 Mipep-204ENSMUST00000225043 1548 ntBASIC21.48■■□□□ 1.03
H2afb1Q9CQ70 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
H2afb1Q9CQ70 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
H2afb1Q9CQ70 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
H2afb1Q9CQ70 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
H2afb1Q9CQ70 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
H2afb1Q9CQ70 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
H2afb1Q9CQ70 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC21.39■■□□□ 1.01
H2afb1Q9CQ70 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC21.39■■□□□ 1.01
H2afb1Q9CQ70 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC21.38■■□□□ 1.01
H2afb1Q9CQ70 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
H2afb1Q9CQ70 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
H2afb1Q9CQ70 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
H2afb1Q9CQ70 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
H2afb1Q9CQ70 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms