Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC35.28■■■■□ 3.24
Trim34aQ99PP6 CT025624.2-201ENSMUST00000223609 1909 ntBASIC35.27■■■■□ 3.24
Trim34aQ99PP6 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC35.22■■■■□ 3.23
Trim34aQ99PP6 Gm42596-201ENSMUST00000196305 1958 ntBASIC35.22■■■■□ 3.23
Trim34aQ99PP6 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC35.18■■■■□ 3.22
Trim34aQ99PP6 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC35.15■■■■□ 3.22
Trim34aQ99PP6 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC35.14■■■■□ 3.22
Trim34aQ99PP6 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC35.12■■■■□ 3.21
Trim34aQ99PP6 Gm27322-201ENSMUST00000184007 104 ntBASIC35.09■■■■□ 3.21
Trim34aQ99PP6 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC35.08■■■■□ 3.21
Trim34aQ99PP6 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC35.08■■■■□ 3.21
Trim34aQ99PP6 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC35.03■■■■□ 3.2
Trim34aQ99PP6 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC34.98■■■■□ 3.19
Trim34aQ99PP6 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC34.96■■■■□ 3.19
Trim34aQ99PP6 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC34.89■■■■□ 3.18
Trim34aQ99PP6 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC34.85■■■■□ 3.17
Trim34aQ99PP6 Gm24804-201ENSMUST00000174982 85 ntBASIC34.79■■■■□ 3.16
Trim34aQ99PP6 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC34.71■■■■□ 3.15
Trim34aQ99PP6 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC34.7■■■■□ 3.15
Trim34aQ99PP6 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC34.7■■■■□ 3.14
Trim34aQ99PP6 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC34.66■■■■□ 3.14
Trim34aQ99PP6 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC34.63■■■■□ 3.13
Trim34aQ99PP6 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC34.62■■■■□ 3.13
Trim34aQ99PP6 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC34.62■■■■□ 3.13
Trim34aQ99PP6 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC34.59■■■■□ 3.13
Trim34aQ99PP6 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC34.55■■■■□ 3.12
Trim34aQ99PP6 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC34.53■■■■□ 3.12
Trim34aQ99PP6 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC34.48■■■■□ 3.11
Trim34aQ99PP6 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC34.42■■■■□ 3.1
Trim34aQ99PP6 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC34.4■■■■□ 3.1
Trim34aQ99PP6 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC34.38■■■■□ 3.09
Trim34aQ99PP6 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC34.36■■■■□ 3.09
Trim34aQ99PP6 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC34.34■■■■□ 3.09
Trim34aQ99PP6 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC34.32■■■■□ 3.08
Trim34aQ99PP6 AC166822.3-201ENSMUST00000227394 661 ntBASIC34.29■■■■□ 3.08
Trim34aQ99PP6 AL845457.1-201ENSMUST00000197244 68 ntBASIC34.26■■■■□ 3.08
Trim34aQ99PP6 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC34.24■■■■□ 3.07
Trim34aQ99PP6 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC34.24■■■■□ 3.07
Trim34aQ99PP6 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC34.24■■■■□ 3.07
Trim34aQ99PP6 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC34.23■■■■□ 3.07
Trim34aQ99PP6 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC34.22■■■■□ 3.07
Trim34aQ99PP6 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC34.2■■■■□ 3.07
Trim34aQ99PP6 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC34.2■■■■□ 3.07
Trim34aQ99PP6 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC34.19■■■■□ 3.06
Trim34aQ99PP6 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC34.18■■■■□ 3.06
Trim34aQ99PP6 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC34.17■■■■□ 3.06
Trim34aQ99PP6 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC34.17■■■■□ 3.06
Trim34aQ99PP6 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC34.15■■■■□ 3.06
Trim34aQ99PP6 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC34.15■■■■□ 3.06
Trim34aQ99PP6 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC34.13■■■■□ 3.05
Trim34aQ99PP6 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC34.11■■■■□ 3.05
Trim34aQ99PP6 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC34.08■■■■□ 3.05
Trim34aQ99PP6 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC34.02■■■■□ 3.04
Trim34aQ99PP6 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC34.01■■■■□ 3.03
Trim34aQ99PP6 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC33.98■■■■□ 3.03
Trim34aQ99PP6 Zfp131-205ENSMUST00000223812 663 ntBASIC33.98■■■■□ 3.03
Trim34aQ99PP6 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC33.96■■■■□ 3.03
Trim34aQ99PP6 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC33.92■■■■□ 3.02
Trim34aQ99PP6 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC33.91■■■■□ 3.02
Trim34aQ99PP6 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC33.9■■■■□ 3.02
Trim34aQ99PP6 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC33.85■■■■□ 3.01
Trim34aQ99PP6 Zfp131-207ENSMUST00000224946 1783 ntBASIC33.85■■■■□ 3.01
Trim34aQ99PP6 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC33.81■■■■□ 3
Trim34aQ99PP6 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC33.81■■■■□ 3
Trim34aQ99PP6 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC33.79■■■■□ 3
Trim34aQ99PP6 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC33.75■■■□□ 2.99
Trim34aQ99PP6 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC33.71■■■□□ 2.99
Trim34aQ99PP6 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC33.71■■■□□ 2.99
Trim34aQ99PP6 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC33.7■■■□□ 2.98
Trim34aQ99PP6 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC33.69■■■□□ 2.98
Trim34aQ99PP6 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC33.68■■■□□ 2.98
Trim34aQ99PP6 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC33.64■■■□□ 2.98
Trim34aQ99PP6 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC33.62■■■□□ 2.97
Trim34aQ99PP6 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC33.61■■■□□ 2.97
Trim34aQ99PP6 Gm16148-201ENSMUST00000119653 893 ntBASIC33.59■■■□□ 2.97
Trim34aQ99PP6 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC33.56■■■□□ 2.96
Trim34aQ99PP6 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC33.55■■■□□ 2.96
Trim34aQ99PP6 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC33.54■■■□□ 2.96
Trim34aQ99PP6 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC33.53■■■□□ 2.96
Trim34aQ99PP6 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC33.52■■■□□ 2.96
Trim34aQ99PP6 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC33.52■■■□□ 2.96
Trim34aQ99PP6 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC33.48■■■□□ 2.95
Trim34aQ99PP6 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC33.48■■■□□ 2.95
Trim34aQ99PP6 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC33.47■■■□□ 2.95
Trim34aQ99PP6 Peli2-204ENSMUST00000226513 1320 ntBASIC33.46■■■□□ 2.95
Trim34aQ99PP6 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC33.44■■■□□ 2.94
Trim34aQ99PP6 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC33.41■■■□□ 2.94
Trim34aQ99PP6 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC33.4■■■□□ 2.94
Trim34aQ99PP6 Mipep-204ENSMUST00000225043 1548 ntBASIC33.39■■■□□ 2.94
Trim34aQ99PP6 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC33.39■■■□□ 2.94
Trim34aQ99PP6 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC33.38■■■□□ 2.93
Trim34aQ99PP6 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC33.37■■■□□ 2.93
Trim34aQ99PP6 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC33.35■■■□□ 2.93
Trim34aQ99PP6 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC33.35■■■□□ 2.93
Trim34aQ99PP6 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC33.35■■■□□ 2.93
Trim34aQ99PP6 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC33.29■■■□□ 2.92
Trim34aQ99PP6 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC33.29■■■□□ 2.92
Trim34aQ99PP6 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC33.28■■■□□ 2.92
Trim34aQ99PP6 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC33.28■■■□□ 2.92
Trim34aQ99PP6 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC33.28■■■□□ 2.92
Retrieved 100 of 76,532 protein–RNA pairs in 8.7 ms