Protein–RNA interactions for Protein: Q99NE9

Pbx4, Pre-B-cell leukemia transcription factor 4, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pbx4Q99NE9 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC32.42■■■□□ 2.78
Pbx4Q99NE9 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC32.37■■■□□ 2.77
Pbx4Q99NE9 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC32.31■■■□□ 2.76
Pbx4Q99NE9 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC32.31■■■□□ 2.76
Pbx4Q99NE9 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
Pbx4Q99NE9 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC32.21■■■□□ 2.75
Pbx4Q99NE9 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC32.18■■■□□ 2.74
Pbx4Q99NE9 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC32.14■■■□□ 2.74
Pbx4Q99NE9 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC32.1■■■□□ 2.73
Pbx4Q99NE9 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC32.08■■■□□ 2.73
Pbx4Q99NE9 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
Pbx4Q99NE9 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC32.02■■■□□ 2.72
Pbx4Q99NE9 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC32.02■■■□□ 2.72
Pbx4Q99NE9 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC32■■■□□ 2.71
Pbx4Q99NE9 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
Pbx4Q99NE9 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
Pbx4Q99NE9 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC31.91■■■□□ 2.7
Pbx4Q99NE9 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC31.89■■■□□ 2.69
Pbx4Q99NE9 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC31.86■■■□□ 2.69
Pbx4Q99NE9 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC31.85■■■□□ 2.69
Pbx4Q99NE9 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
Pbx4Q99NE9 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC31.84■■■□□ 2.69
Pbx4Q99NE9 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC31.83■■■□□ 2.69
Pbx4Q99NE9 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
Pbx4Q99NE9 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
Pbx4Q99NE9 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC31.74■■■□□ 2.67
Pbx4Q99NE9 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC31.74■■■□□ 2.67
Pbx4Q99NE9 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
Pbx4Q99NE9 Gm5987-201ENSMUST00000196433 1151 ntBASIC31.68■■■□□ 2.66
Pbx4Q99NE9 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC31.68■■■□□ 2.66
Pbx4Q99NE9 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
Pbx4Q99NE9 Tdp2-203ENSMUST00000223804 1136 ntBASIC31.65■■■□□ 2.66
Pbx4Q99NE9 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC31.6■■■□□ 2.65
Pbx4Q99NE9 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC31.59■■■□□ 2.65
Pbx4Q99NE9 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
Pbx4Q99NE9 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC31.53■■■□□ 2.64
Pbx4Q99NE9 AC166822.3-201ENSMUST00000227394 661 ntBASIC31.51■■■□□ 2.63
Pbx4Q99NE9 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC31.48■■■□□ 2.63
Pbx4Q99NE9 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
Pbx4Q99NE9 Gm16148-201ENSMUST00000119653 893 ntBASIC31.45■■■□□ 2.63
Pbx4Q99NE9 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC31.45■■■□□ 2.63
Pbx4Q99NE9 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
Pbx4Q99NE9 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC31.41■■■□□ 2.62
Pbx4Q99NE9 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Pbx4Q99NE9 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC31.36■■■□□ 2.61
Pbx4Q99NE9 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
Pbx4Q99NE9 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC31.32■■■□□ 2.6
Pbx4Q99NE9 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC31.32■■■□□ 2.6
Pbx4Q99NE9 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC31.31■■■□□ 2.6
Pbx4Q99NE9 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC31.3■■■□□ 2.6
Pbx4Q99NE9 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC31.3■■■□□ 2.6
Pbx4Q99NE9 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC31.29■■■□□ 2.6
Pbx4Q99NE9 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC31.26■■■□□ 2.6
Pbx4Q99NE9 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Pbx4Q99NE9 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC31.25■■■□□ 2.59
Pbx4Q99NE9 Gm45855-201ENSMUST00000212546 880 ntBASIC31.24■■■□□ 2.59
Pbx4Q99NE9 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC31.24■■■□□ 2.59
Pbx4Q99NE9 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC31.24■■■□□ 2.59
Pbx4Q99NE9 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
Pbx4Q99NE9 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
Pbx4Q99NE9 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC31.18■■■□□ 2.58
Pbx4Q99NE9 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Pbx4Q99NE9 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC31.15■■■□□ 2.58
Pbx4Q99NE9 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
Pbx4Q99NE9 Psd-208ENSMUST00000224556 2034 ntBASIC31.12■■■□□ 2.57
Pbx4Q99NE9 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC31.11■■■□□ 2.57
Pbx4Q99NE9 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Pbx4Q99NE9 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC31.09■■■□□ 2.57
Pbx4Q99NE9 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC31.08■■■□□ 2.57
Pbx4Q99NE9 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC31.08■■■□□ 2.57
Pbx4Q99NE9 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC31.03■■■□□ 2.56
Pbx4Q99NE9 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC31.03■■■□□ 2.56
Pbx4Q99NE9 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC31.01■■■□□ 2.55
Pbx4Q99NE9 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
Pbx4Q99NE9 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Pbx4Q99NE9 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
Pbx4Q99NE9 AL845457.1-201ENSMUST00000197244 68 ntBASIC30.97■■■□□ 2.55
Pbx4Q99NE9 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
Pbx4Q99NE9 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC30.9■■■□□ 2.54
Pbx4Q99NE9 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.53
Pbx4Q99NE9 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
Pbx4Q99NE9 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
Pbx4Q99NE9 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
Pbx4Q99NE9 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC30.84■■■□□ 2.53
Pbx4Q99NE9 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
Pbx4Q99NE9 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC30.82■■■□□ 2.52
Pbx4Q99NE9 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
Pbx4Q99NE9 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
Pbx4Q99NE9 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC30.8■■■□□ 2.52
Pbx4Q99NE9 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
Pbx4Q99NE9 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.52
Pbx4Q99NE9 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC30.75■■■□□ 2.51
Pbx4Q99NE9 Peli2-204ENSMUST00000226513 1320 ntBASIC30.74■■■□□ 2.51
Pbx4Q99NE9 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Pbx4Q99NE9 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC30.74■■■□□ 2.51
Pbx4Q99NE9 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Pbx4Q99NE9 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
Pbx4Q99NE9 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC30.72■■■□□ 2.51
Pbx4Q99NE9 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC30.71■■■□□ 2.51
Pbx4Q99NE9 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC30.71■■■□□ 2.51
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms