Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC28.72■■■□□ 2.19
Pcdhb6Q91XZ4 Rab21-202ENSMUST00000218831 843 ntBASIC28.71■■■□□ 2.19
Pcdhb6Q91XZ4 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
Pcdhb6Q91XZ4 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Pcdhb6Q91XZ4 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC28.64■■■□□ 2.17
Pcdhb6Q91XZ4 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC28.63■■■□□ 2.17
Pcdhb6Q91XZ4 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Pcdhb6Q91XZ4 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Pcdhb6Q91XZ4 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
Pcdhb6Q91XZ4 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC28.53■■■□□ 2.16
Pcdhb6Q91XZ4 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC28.5■■■□□ 2.15
Pcdhb6Q91XZ4 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC28.47■■■□□ 2.15
Pcdhb6Q91XZ4 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
Pcdhb6Q91XZ4 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
Pcdhb6Q91XZ4 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
Pcdhb6Q91XZ4 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
Pcdhb6Q91XZ4 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Pcdhb6Q91XZ4 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
Pcdhb6Q91XZ4 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Pcdhb6Q91XZ4 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC28.33■■■□□ 2.13
Pcdhb6Q91XZ4 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC28.32■■■□□ 2.12
Pcdhb6Q91XZ4 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Pcdhb6Q91XZ4 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC28.28■■■□□ 2.12
Pcdhb6Q91XZ4 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC28.26■■■□□ 2.11
Pcdhb6Q91XZ4 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC28.25■■■□□ 2.11
Pcdhb6Q91XZ4 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC28.22■■■□□ 2.11
Pcdhb6Q91XZ4 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC28.2■■■□□ 2.11
Pcdhb6Q91XZ4 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Pcdhb6Q91XZ4 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Pcdhb6Q91XZ4 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC28.19■■■□□ 2.1
Pcdhb6Q91XZ4 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC28.18■■■□□ 2.1
Pcdhb6Q91XZ4 Zfp131-207ENSMUST00000224946 1783 ntBASIC28.17■■■□□ 2.1
Pcdhb6Q91XZ4 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
Pcdhb6Q91XZ4 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC28.17■■■□□ 2.1
Pcdhb6Q91XZ4 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
Pcdhb6Q91XZ4 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Pcdhb6Q91XZ4 Gm25262-201ENSMUST00000174934 133 ntBASIC28.15■■■□□ 2.1
Pcdhb6Q91XZ4 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Pcdhb6Q91XZ4 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Pcdhb6Q91XZ4 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Pcdhb6Q91XZ4 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Pcdhb6Q91XZ4 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC27.95■■■□□ 2.06
Pcdhb6Q91XZ4 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC27.95■■■□□ 2.06
Pcdhb6Q91XZ4 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
Pcdhb6Q91XZ4 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC27.92■■■□□ 2.06
Pcdhb6Q91XZ4 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
Pcdhb6Q91XZ4 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
Pcdhb6Q91XZ4 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
Pcdhb6Q91XZ4 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
Pcdhb6Q91XZ4 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC27.81■■■□□ 2.04
Pcdhb6Q91XZ4 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Pcdhb6Q91XZ4 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Pcdhb6Q91XZ4 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC27.79■■■□□ 2.04
Pcdhb6Q91XZ4 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC27.78■■■□□ 2.04
Pcdhb6Q91XZ4 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC27.76■■■□□ 2.04
Pcdhb6Q91XZ4 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
Pcdhb6Q91XZ4 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC27.73■■■□□ 2.03
Pcdhb6Q91XZ4 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
Pcdhb6Q91XZ4 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
Pcdhb6Q91XZ4 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC27.68■■■□□ 2.02
Pcdhb6Q91XZ4 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC27.67■■■□□ 2.02
Pcdhb6Q91XZ4 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC27.66■■■□□ 2.02
Pcdhb6Q91XZ4 AL845457.1-201ENSMUST00000197244 68 ntBASIC27.65■■■□□ 2.02
Pcdhb6Q91XZ4 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC27.64■■■□□ 2.01
Pcdhb6Q91XZ4 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
Pcdhb6Q91XZ4 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
Pcdhb6Q91XZ4 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC27.59■■■□□ 2.01
Pcdhb6Q91XZ4 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC27.58■■■□□ 2.01
Pcdhb6Q91XZ4 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
Pcdhb6Q91XZ4 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
Pcdhb6Q91XZ4 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Pcdhb6Q91XZ4 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC27.5■■□□□ 1.99
Pcdhb6Q91XZ4 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC27.49■■□□□ 1.99
Pcdhb6Q91XZ4 Gm17082-201ENSMUST00000166043 1091 ntBASIC27.48■■□□□ 1.99
Pcdhb6Q91XZ4 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC27.48■■□□□ 1.99
Pcdhb6Q91XZ4 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
Pcdhb6Q91XZ4 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
Pcdhb6Q91XZ4 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Pcdhb6Q91XZ4 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC27.42■■□□□ 1.98
Pcdhb6Q91XZ4 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Pcdhb6Q91XZ4 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Pcdhb6Q91XZ4 Mipep-204ENSMUST00000225043 1548 ntBASIC27.4■■□□□ 1.98
Pcdhb6Q91XZ4 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Pcdhb6Q91XZ4 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC27.39■■□□□ 1.97
Pcdhb6Q91XZ4 Gm2415-204ENSMUST00000190235 2004 ntBASIC27.38■■□□□ 1.97
Pcdhb6Q91XZ4 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
Pcdhb6Q91XZ4 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
Pcdhb6Q91XZ4 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC27.36■■□□□ 1.97
Pcdhb6Q91XZ4 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Pcdhb6Q91XZ4 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC27.35■■□□□ 1.97
Pcdhb6Q91XZ4 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC27.34■■□□□ 1.97
Pcdhb6Q91XZ4 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC27.34■■□□□ 1.97
Pcdhb6Q91XZ4 Gm27322-201ENSMUST00000184007 104 ntBASIC27.34■■□□□ 1.97
Pcdhb6Q91XZ4 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC27.32■■□□□ 1.96
Pcdhb6Q91XZ4 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC27.24■■□□□ 1.95
Pcdhb6Q91XZ4 Gm26115-201ENSMUST00000175605 87 ntBASIC27.21■■□□□ 1.95
Pcdhb6Q91XZ4 AC166822.3-201ENSMUST00000227394 661 ntBASIC27.21■■□□□ 1.95
Pcdhb6Q91XZ4 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC27.19■■□□□ 1.94
Pcdhb6Q91XZ4 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Pcdhb6Q91XZ4 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms