Protein–RNA interactions for Protein: Q91XX8

Pcdhgb1, Protocadherin gamma B1, mousemouse

Predictions only

Length 918 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb1Q91XX8 Gm8109-201ENSMUST00000194076 746 ntBASIC29.08■■■□□ 2.25
Pcdhgb1Q91XX8 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC29.03■■■□□ 2.24
Pcdhgb1Q91XX8 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC29.03■■■□□ 2.24
Pcdhgb1Q91XX8 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC29.02■■■□□ 2.24
Pcdhgb1Q91XX8 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC29.01■■■□□ 2.23
Pcdhgb1Q91XX8 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC29■■■□□ 2.23
Pcdhgb1Q91XX8 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC28.97■■■□□ 2.23
Pcdhgb1Q91XX8 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
Pcdhgb1Q91XX8 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC28.89■■■□□ 2.22
Pcdhgb1Q91XX8 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
Pcdhgb1Q91XX8 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
Pcdhgb1Q91XX8 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
Pcdhgb1Q91XX8 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
Pcdhgb1Q91XX8 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC28.79■■■□□ 2.2
Pcdhgb1Q91XX8 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
Pcdhgb1Q91XX8 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC28.73■■■□□ 2.19
Pcdhgb1Q91XX8 Gm17082-201ENSMUST00000166043 1091 ntBASIC28.73■■■□□ 2.19
Pcdhgb1Q91XX8 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
Pcdhgb1Q91XX8 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
Pcdhgb1Q91XX8 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC28.7■■■□□ 2.18
Pcdhgb1Q91XX8 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Pcdhgb1Q91XX8 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Pcdhgb1Q91XX8 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC28.66■■■□□ 2.18
Pcdhgb1Q91XX8 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Pcdhgb1Q91XX8 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC28.58■■■□□ 2.17
Pcdhgb1Q91XX8 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
Pcdhgb1Q91XX8 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
Pcdhgb1Q91XX8 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC28.56■■■□□ 2.16
Pcdhgb1Q91XX8 Gm27322-201ENSMUST00000184007 104 ntBASIC28.54■■■□□ 2.16
Pcdhgb1Q91XX8 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Pcdhgb1Q91XX8 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC28.47■■■□□ 2.15
Pcdhgb1Q91XX8 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC28.44■■■□□ 2.14
Pcdhgb1Q91XX8 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
Pcdhgb1Q91XX8 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Pcdhgb1Q91XX8 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC28.35■■■□□ 2.13
Pcdhgb1Q91XX8 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Pcdhgb1Q91XX8 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Pcdhgb1Q91XX8 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Pcdhgb1Q91XX8 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC28.26■■■□□ 2.11
Pcdhgb1Q91XX8 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC28.24■■■□□ 2.11
Pcdhgb1Q91XX8 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Pcdhgb1Q91XX8 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Pcdhgb1Q91XX8 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
Pcdhgb1Q91XX8 AL845457.1-201ENSMUST00000197244 68 ntBASIC28.17■■■□□ 2.1
Pcdhgb1Q91XX8 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Pcdhgb1Q91XX8 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC28.15■■■□□ 2.1
Pcdhgb1Q91XX8 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
Pcdhgb1Q91XX8 Gm24804-201ENSMUST00000174982 85 ntBASIC28.14■■■□□ 2.1
Pcdhgb1Q91XX8 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC28.13■■■□□ 2.09
Pcdhgb1Q91XX8 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC28.12■■■□□ 2.09
Pcdhgb1Q91XX8 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Pcdhgb1Q91XX8 Zfp131-207ENSMUST00000224946 1783 ntBASIC28.1■■■□□ 2.09
Pcdhgb1Q91XX8 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Pcdhgb1Q91XX8 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Pcdhgb1Q91XX8 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Pcdhgb1Q91XX8 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC28.07■■■□□ 2.08
Pcdhgb1Q91XX8 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC28.06■■■□□ 2.08
Pcdhgb1Q91XX8 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
Pcdhgb1Q91XX8 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC28.03■■■□□ 2.08
Pcdhgb1Q91XX8 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
Pcdhgb1Q91XX8 AC166822.3-201ENSMUST00000227394 661 ntBASIC28■■■□□ 2.07
Pcdhgb1Q91XX8 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
Pcdhgb1Q91XX8 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC27.96■■■□□ 2.07
Pcdhgb1Q91XX8 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
Pcdhgb1Q91XX8 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC27.93■■■□□ 2.06
Pcdhgb1Q91XX8 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
Pcdhgb1Q91XX8 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
Pcdhgb1Q91XX8 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
Pcdhgb1Q91XX8 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
Pcdhgb1Q91XX8 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
Pcdhgb1Q91XX8 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
Pcdhgb1Q91XX8 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
Pcdhgb1Q91XX8 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC27.7■■■□□ 2.02
Pcdhgb1Q91XX8 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
Pcdhgb1Q91XX8 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
Pcdhgb1Q91XX8 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC27.68■■■□□ 2.02
Pcdhgb1Q91XX8 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
Pcdhgb1Q91XX8 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
Pcdhgb1Q91XX8 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC27.64■■■□□ 2.02
Pcdhgb1Q91XX8 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC27.64■■■□□ 2.02
Pcdhgb1Q91XX8 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
Pcdhgb1Q91XX8 Mipep-204ENSMUST00000225043 1548 ntBASIC27.58■■■□□ 2.01
Pcdhgb1Q91XX8 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
Pcdhgb1Q91XX8 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC27.56■■■□□ 2
Pcdhgb1Q91XX8 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
Pcdhgb1Q91XX8 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
Pcdhgb1Q91XX8 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC27.53■■■□□ 2
Pcdhgb1Q91XX8 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC27.53■■■□□ 2
Pcdhgb1Q91XX8 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC27.52■■■□□ 2
Pcdhgb1Q91XX8 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC27.52■■■□□ 2
Pcdhgb1Q91XX8 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC27.52■■■□□ 2
Pcdhgb1Q91XX8 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
Pcdhgb1Q91XX8 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
Pcdhgb1Q91XX8 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
Pcdhgb1Q91XX8 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
Pcdhgb1Q91XX8 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC27.45■■□□□ 1.99
Pcdhgb1Q91XX8 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Pcdhgb1Q91XX8 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
Pcdhgb1Q91XX8 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Pcdhgb1Q91XX8 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC27.4■■□□□ 1.98
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms