Protein–RNA interactions for Protein: Q91XX6

Pcdhgb4, Protocadherin gamma B4, mousemouse

Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb4Q91XX6 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC29.36■■■□□ 2.29
Pcdhgb4Q91XX6 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
Pcdhgb4Q91XX6 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC29.29■■■□□ 2.28
Pcdhgb4Q91XX6 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
Pcdhgb4Q91XX6 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
Pcdhgb4Q91XX6 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
Pcdhgb4Q91XX6 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC29.19■■■□□ 2.26
Pcdhgb4Q91XX6 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC29.17■■■□□ 2.26
Pcdhgb4Q91XX6 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC29.11■■■□□ 2.25
Pcdhgb4Q91XX6 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
Pcdhgb4Q91XX6 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC29.02■■■□□ 2.24
Pcdhgb4Q91XX6 Rab21-202ENSMUST00000218831 843 ntBASIC29.02■■■□□ 2.24
Pcdhgb4Q91XX6 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
Pcdhgb4Q91XX6 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
Pcdhgb4Q91XX6 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
Pcdhgb4Q91XX6 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC28.92■■■□□ 2.22
Pcdhgb4Q91XX6 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
Pcdhgb4Q91XX6 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
Pcdhgb4Q91XX6 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
Pcdhgb4Q91XX6 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC28.84■■■□□ 2.21
Pcdhgb4Q91XX6 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC28.84■■■□□ 2.21
Pcdhgb4Q91XX6 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC28.84■■■□□ 2.21
Pcdhgb4Q91XX6 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC28.83■■■□□ 2.21
Pcdhgb4Q91XX6 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC28.82■■■□□ 2.2
Pcdhgb4Q91XX6 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
Pcdhgb4Q91XX6 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
Pcdhgb4Q91XX6 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
Pcdhgb4Q91XX6 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC28.74■■■□□ 2.19
Pcdhgb4Q91XX6 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC28.74■■■□□ 2.19
Pcdhgb4Q91XX6 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC28.72■■■□□ 2.19
Pcdhgb4Q91XX6 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
Pcdhgb4Q91XX6 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC28.72■■■□□ 2.19
Pcdhgb4Q91XX6 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC28.71■■■□□ 2.19
Pcdhgb4Q91XX6 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC28.7■■■□□ 2.19
Pcdhgb4Q91XX6 Zfp131-207ENSMUST00000224946 1783 ntBASIC28.7■■■□□ 2.18
Pcdhgb4Q91XX6 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
Pcdhgb4Q91XX6 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC28.69■■■□□ 2.18
Pcdhgb4Q91XX6 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC28.67■■■□□ 2.18
Pcdhgb4Q91XX6 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Pcdhgb4Q91XX6 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC28.65■■■□□ 2.18
Pcdhgb4Q91XX6 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
Pcdhgb4Q91XX6 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Pcdhgb4Q91XX6 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC28.6■■■□□ 2.17
Pcdhgb4Q91XX6 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
Pcdhgb4Q91XX6 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
Pcdhgb4Q91XX6 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC28.53■■■□□ 2.16
Pcdhgb4Q91XX6 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
Pcdhgb4Q91XX6 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
Pcdhgb4Q91XX6 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
Pcdhgb4Q91XX6 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
Pcdhgb4Q91XX6 Gm25262-201ENSMUST00000174934 133 ntBASIC28.44■■■□□ 2.14
Pcdhgb4Q91XX6 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC28.44■■■□□ 2.14
Pcdhgb4Q91XX6 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Pcdhgb4Q91XX6 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC28.41■■■□□ 2.14
Pcdhgb4Q91XX6 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC28.4■■■□□ 2.14
Pcdhgb4Q91XX6 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
Pcdhgb4Q91XX6 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Pcdhgb4Q91XX6 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC28.31■■■□□ 2.12
Pcdhgb4Q91XX6 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Pcdhgb4Q91XX6 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC28.24■■■□□ 2.11
Pcdhgb4Q91XX6 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
Pcdhgb4Q91XX6 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
Pcdhgb4Q91XX6 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC28.15■■■□□ 2.1
Pcdhgb4Q91XX6 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC28.15■■■□□ 2.1
Pcdhgb4Q91XX6 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
Pcdhgb4Q91XX6 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC28.13■■■□□ 2.09
Pcdhgb4Q91XX6 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
Pcdhgb4Q91XX6 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC28.11■■■□□ 2.09
Pcdhgb4Q91XX6 AL845457.1-201ENSMUST00000197244 68 ntBASIC28.09■■■□□ 2.09
Pcdhgb4Q91XX6 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
Pcdhgb4Q91XX6 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
Pcdhgb4Q91XX6 Gm2415-204ENSMUST00000190235 2004 ntBASIC28.08■■■□□ 2.08
Pcdhgb4Q91XX6 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC28.07■■■□□ 2.08
Pcdhgb4Q91XX6 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Pcdhgb4Q91XX6 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC28■■■□□ 2.07
Pcdhgb4Q91XX6 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
Pcdhgb4Q91XX6 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
Pcdhgb4Q91XX6 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC27.98■■■□□ 2.07
Pcdhgb4Q91XX6 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC27.95■■■□□ 2.07
Pcdhgb4Q91XX6 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC27.95■■■□□ 2.06
Pcdhgb4Q91XX6 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
Pcdhgb4Q91XX6 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC27.92■■■□□ 2.06
Pcdhgb4Q91XX6 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
Pcdhgb4Q91XX6 Mipep-204ENSMUST00000225043 1548 ntBASIC27.88■■■□□ 2.05
Pcdhgb4Q91XX6 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC27.87■■■□□ 2.05
Pcdhgb4Q91XX6 Gm6658-202ENSMUST00000209493 1885 ntBASIC27.85■■■□□ 2.05
Pcdhgb4Q91XX6 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
Pcdhgb4Q91XX6 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
Pcdhgb4Q91XX6 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
Pcdhgb4Q91XX6 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC27.81■■■□□ 2.04
Pcdhgb4Q91XX6 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
Pcdhgb4Q91XX6 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC27.78■■■□□ 2.04
Pcdhgb4Q91XX6 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC27.78■■■□□ 2.04
Pcdhgb4Q91XX6 Gm17082-201ENSMUST00000166043 1091 ntBASIC27.78■■■□□ 2.04
Pcdhgb4Q91XX6 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC27.78■■■□□ 2.04
Pcdhgb4Q91XX6 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC27.77■■■□□ 2.04
Pcdhgb4Q91XX6 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Pcdhgb4Q91XX6 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC27.74■■■□□ 2.03
Pcdhgb4Q91XX6 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC27.73■■■□□ 2.03
Pcdhgb4Q91XX6 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC27.71■■■□□ 2.03
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms