Protein–RNA interactions for Protein: Q91XX1

Pcdhgc3, Protocadherin gamma C3, mousemouse

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc3Q91XX1 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Pcdhgc3Q91XX1 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Pcdhgc3Q91XX1 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC25.89■■□□□ 1.74
Pcdhgc3Q91XX1 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Pcdhgc3Q91XX1 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC25.85■■□□□ 1.73
Pcdhgc3Q91XX1 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Pcdhgc3Q91XX1 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Pcdhgc3Q91XX1 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Pcdhgc3Q91XX1 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Pcdhgc3Q91XX1 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Pcdhgc3Q91XX1 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Pcdhgc3Q91XX1 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Pcdhgc3Q91XX1 AC153504.1-201ENSMUST00000218379 2290 ntBASIC25.52■■□□□ 1.68
Pcdhgc3Q91XX1 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC25.45■■□□□ 1.67
Pcdhgc3Q91XX1 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Pcdhgc3Q91XX1 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Pcdhgc3Q91XX1 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC25.44■■□□□ 1.66
Pcdhgc3Q91XX1 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Pcdhgc3Q91XX1 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC25.41■■□□□ 1.66
Pcdhgc3Q91XX1 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC25.4■■□□□ 1.66
Pcdhgc3Q91XX1 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Pcdhgc3Q91XX1 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Pcdhgc3Q91XX1 Gm2415-204ENSMUST00000190235 2004 ntBASIC25.37■■□□□ 1.65
Pcdhgc3Q91XX1 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC25.33■■□□□ 1.64
Pcdhgc3Q91XX1 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC25.29■■□□□ 1.64
Pcdhgc3Q91XX1 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Pcdhgc3Q91XX1 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC25.27■■□□□ 1.64
Pcdhgc3Q91XX1 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
Pcdhgc3Q91XX1 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Pcdhgc3Q91XX1 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Pcdhgc3Q91XX1 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Pcdhgc3Q91XX1 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
Pcdhgc3Q91XX1 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC25.16■■□□□ 1.62
Pcdhgc3Q91XX1 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Pcdhgc3Q91XX1 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Pcdhgc3Q91XX1 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC25.12■■□□□ 1.61
Pcdhgc3Q91XX1 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Pcdhgc3Q91XX1 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
Pcdhgc3Q91XX1 Gm6658-202ENSMUST00000209493 1885 ntBASIC25.11■■□□□ 1.61
Pcdhgc3Q91XX1 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC25.11■■□□□ 1.61
Pcdhgc3Q91XX1 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC25.1■■□□□ 1.61
Pcdhgc3Q91XX1 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Pcdhgc3Q91XX1 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Pcdhgc3Q91XX1 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Pcdhgc3Q91XX1 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
Pcdhgc3Q91XX1 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Pcdhgc3Q91XX1 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Pcdhgc3Q91XX1 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Pcdhgc3Q91XX1 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Pcdhgc3Q91XX1 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Pcdhgc3Q91XX1 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
Pcdhgc3Q91XX1 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC24.99■■□□□ 1.59
Pcdhgc3Q91XX1 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC24.98■■□□□ 1.59
Pcdhgc3Q91XX1 Gm25238-201ENSMUST00000174914 89 ntBASIC24.98■■□□□ 1.59
Pcdhgc3Q91XX1 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC24.97■■□□□ 1.59
Pcdhgc3Q91XX1 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Pcdhgc3Q91XX1 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Pcdhgc3Q91XX1 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC24.94■■□□□ 1.58
Pcdhgc3Q91XX1 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Pcdhgc3Q91XX1 Zxda-201ENSMUST00000117281 2621 ntBASIC24.93■■□□□ 1.58
Pcdhgc3Q91XX1 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC24.92■■□□□ 1.58
Pcdhgc3Q91XX1 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Pcdhgc3Q91XX1 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.58
Pcdhgc3Q91XX1 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
Pcdhgc3Q91XX1 Gm9905-201ENSMUST00000065740 1845 ntBASIC24.87■■□□□ 1.57
Pcdhgc3Q91XX1 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC24.87■■□□□ 1.57
Pcdhgc3Q91XX1 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Pcdhgc3Q91XX1 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC24.86■■□□□ 1.57
Pcdhgc3Q91XX1 Gm27325-201ENSMUST00000175467 74 ntBASIC24.85■■□□□ 1.57
Pcdhgc3Q91XX1 Zfp131-207ENSMUST00000224946 1783 ntBASIC24.83■■□□□ 1.57
Pcdhgc3Q91XX1 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC24.83■■□□□ 1.57
Pcdhgc3Q91XX1 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC24.8■■□□□ 1.56
Pcdhgc3Q91XX1 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
Pcdhgc3Q91XX1 Gm6206-201ENSMUST00000133472 2199 ntBASIC24.79■■□□□ 1.56
Pcdhgc3Q91XX1 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC24.78■■□□□ 1.56
Pcdhgc3Q91XX1 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Pcdhgc3Q91XX1 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
Pcdhgc3Q91XX1 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
Pcdhgc3Q91XX1 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Pcdhgc3Q91XX1 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC24.75■■□□□ 1.55
Pcdhgc3Q91XX1 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Pcdhgc3Q91XX1 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC24.73■■□□□ 1.55
Pcdhgc3Q91XX1 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Pcdhgc3Q91XX1 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Pcdhgc3Q91XX1 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Pcdhgc3Q91XX1 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Pcdhgc3Q91XX1 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
Pcdhgc3Q91XX1 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC24.67■■□□□ 1.54
Pcdhgc3Q91XX1 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Pcdhgc3Q91XX1 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Pcdhgc3Q91XX1 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Pcdhgc3Q91XX1 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC24.65■■□□□ 1.54
Pcdhgc3Q91XX1 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
Pcdhgc3Q91XX1 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
Pcdhgc3Q91XX1 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Pcdhgc3Q91XX1 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC24.61■■□□□ 1.53
Pcdhgc3Q91XX1 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Pcdhgc3Q91XX1 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Pcdhgc3Q91XX1 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Pcdhgc3Q91XX1 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms