Protein–RNA interactions for Protein: Q91VA1

Slc44a4, Choline transporter-like protein 4, mousemouse

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc44a4Q91VA1 Gm42596-201ENSMUST00000196305 1958 ntBASIC33.98■■■■□ 3.03
Slc44a4Q91VA1 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC33.97■■■■□ 3.03
Slc44a4Q91VA1 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC33.94■■■■□ 3.02
Slc44a4Q91VA1 CT025624.2-201ENSMUST00000223609 1909 ntBASIC33.92■■■■□ 3.02
Slc44a4Q91VA1 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC33.88■■■■□ 3.01
Slc44a4Q91VA1 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC33.81■■■■□ 3
Slc44a4Q91VA1 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC33.76■■■■□ 3
Slc44a4Q91VA1 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC33.73■■■□□ 2.99
Slc44a4Q91VA1 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC33.7■■■□□ 2.98
Slc44a4Q91VA1 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC33.69■■■□□ 2.98
Slc44a4Q91VA1 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC33.65■■■□□ 2.98
Slc44a4Q91VA1 Gm27322-201ENSMUST00000184007 104 ntBASIC33.63■■■□□ 2.97
Slc44a4Q91VA1 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC33.62■■■□□ 2.97
Slc44a4Q91VA1 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC33.59■■■□□ 2.97
Slc44a4Q91VA1 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC33.59■■■□□ 2.97
Slc44a4Q91VA1 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC33.52■■■□□ 2.96
Slc44a4Q91VA1 Gm24804-201ENSMUST00000174982 85 ntBASIC33.48■■■□□ 2.95
Slc44a4Q91VA1 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC33.38■■■□□ 2.93
Slc44a4Q91VA1 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC33.35■■■□□ 2.93
Slc44a4Q91VA1 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC33.33■■■□□ 2.93
Slc44a4Q91VA1 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC33.32■■■□□ 2.92
Slc44a4Q91VA1 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC33.3■■■□□ 2.92
Slc44a4Q91VA1 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC33.29■■■□□ 2.92
Slc44a4Q91VA1 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC33.29■■■□□ 2.92
Slc44a4Q91VA1 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC33.26■■■□□ 2.91
Slc44a4Q91VA1 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC33.26■■■□□ 2.91
Slc44a4Q91VA1 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC33.26■■■□□ 2.91
Slc44a4Q91VA1 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC33.23■■■□□ 2.91
Slc44a4Q91VA1 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC33.19■■■□□ 2.9
Slc44a4Q91VA1 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC33.17■■■□□ 2.9
Slc44a4Q91VA1 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC33.13■■■□□ 2.89
Slc44a4Q91VA1 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
Slc44a4Q91VA1 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC33.09■■■□□ 2.89
Slc44a4Q91VA1 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
Slc44a4Q91VA1 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC33.02■■■□□ 2.88
Slc44a4Q91VA1 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC33■■■□□ 2.87
Slc44a4Q91VA1 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC33■■■□□ 2.87
Slc44a4Q91VA1 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC32.95■■■□□ 2.87
Slc44a4Q91VA1 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC32.95■■■□□ 2.86
Slc44a4Q91VA1 AL845457.1-201ENSMUST00000197244 68 ntBASIC32.94■■■□□ 2.86
Slc44a4Q91VA1 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
Slc44a4Q91VA1 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC32.93■■■□□ 2.86
Slc44a4Q91VA1 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC32.91■■■□□ 2.86
Slc44a4Q91VA1 AC166822.3-201ENSMUST00000227394 661 ntBASIC32.9■■■□□ 2.86
Slc44a4Q91VA1 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC32.89■■■□□ 2.86
Slc44a4Q91VA1 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
Slc44a4Q91VA1 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC32.86■■■□□ 2.85
Slc44a4Q91VA1 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC32.86■■■□□ 2.85
Slc44a4Q91VA1 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
Slc44a4Q91VA1 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.84
Slc44a4Q91VA1 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC32.78■■■□□ 2.84
Slc44a4Q91VA1 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
Slc44a4Q91VA1 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
Slc44a4Q91VA1 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
Slc44a4Q91VA1 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC32.73■■■□□ 2.83
Slc44a4Q91VA1 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC32.69■■■□□ 2.82
Slc44a4Q91VA1 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC32.67■■■□□ 2.82
Slc44a4Q91VA1 Zfp131-205ENSMUST00000223812 663 ntBASIC32.63■■■□□ 2.81
Slc44a4Q91VA1 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC32.62■■■□□ 2.81
Slc44a4Q91VA1 Zfp131-207ENSMUST00000224946 1783 ntBASIC32.62■■■□□ 2.81
Slc44a4Q91VA1 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
Slc44a4Q91VA1 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC32.57■■■□□ 2.8
Slc44a4Q91VA1 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC32.52■■■□□ 2.8
Slc44a4Q91VA1 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC32.51■■■□□ 2.79
Slc44a4Q91VA1 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
Slc44a4Q91VA1 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC32.51■■■□□ 2.79
Slc44a4Q91VA1 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC32.5■■■□□ 2.79
Slc44a4Q91VA1 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC32.45■■■□□ 2.79
Slc44a4Q91VA1 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC32.45■■■□□ 2.78
Slc44a4Q91VA1 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC32.44■■■□□ 2.78
Slc44a4Q91VA1 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
Slc44a4Q91VA1 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC32.37■■■□□ 2.77
Slc44a4Q91VA1 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
Slc44a4Q91VA1 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC32.31■■■□□ 2.76
Slc44a4Q91VA1 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC32.28■■■□□ 2.76
Slc44a4Q91VA1 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC32.27■■■□□ 2.76
Slc44a4Q91VA1 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
Slc44a4Q91VA1 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC32.22■■■□□ 2.75
Slc44a4Q91VA1 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC32.22■■■□□ 2.75
Slc44a4Q91VA1 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC32.21■■■□□ 2.75
Slc44a4Q91VA1 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC32.21■■■□□ 2.75
Slc44a4Q91VA1 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC32.21■■■□□ 2.75
Slc44a4Q91VA1 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
Slc44a4Q91VA1 Peli2-204ENSMUST00000226513 1320 ntBASIC32.17■■■□□ 2.74
Slc44a4Q91VA1 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC32.17■■■□□ 2.74
Slc44a4Q91VA1 Gm16148-201ENSMUST00000119653 893 ntBASIC32.15■■■□□ 2.74
Slc44a4Q91VA1 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC32.14■■■□□ 2.74
Slc44a4Q91VA1 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
Slc44a4Q91VA1 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC32.13■■■□□ 2.73
Slc44a4Q91VA1 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC32.13■■■□□ 2.73
Slc44a4Q91VA1 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC32.11■■■□□ 2.73
Slc44a4Q91VA1 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC32.09■■■□□ 2.73
Slc44a4Q91VA1 Mipep-204ENSMUST00000225043 1548 ntBASIC32.09■■■□□ 2.73
Slc44a4Q91VA1 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
Slc44a4Q91VA1 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
Slc44a4Q91VA1 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC32.07■■■□□ 2.72
Slc44a4Q91VA1 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
Slc44a4Q91VA1 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC32.03■■■□□ 2.72
Slc44a4Q91VA1 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC32.01■■■□□ 2.71
Slc44a4Q91VA1 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC31.99■■■□□ 2.71
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms