Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC28.43■■■□□ 2.14
Trim60Q8VI40 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC28.43■■■□□ 2.14
Trim60Q8VI40 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Trim60Q8VI40 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC28.35■■■□□ 2.13
Trim60Q8VI40 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC28.33■■■□□ 2.13
Trim60Q8VI40 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC28.3■■■□□ 2.12
Trim60Q8VI40 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC28.26■■■□□ 2.11
Trim60Q8VI40 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC28.26■■■□□ 2.11
Trim60Q8VI40 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Trim60Q8VI40 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC28.21■■■□□ 2.11
Trim60Q8VI40 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC28.21■■■□□ 2.11
Trim60Q8VI40 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Trim60Q8VI40 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
Trim60Q8VI40 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
Trim60Q8VI40 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC28.1■■■□□ 2.09
Trim60Q8VI40 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC28.08■■■□□ 2.09
Trim60Q8VI40 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC28.08■■■□□ 2.09
Trim60Q8VI40 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Trim60Q8VI40 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
Trim60Q8VI40 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
Trim60Q8VI40 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Trim60Q8VI40 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC28.01■■■□□ 2.07
Trim60Q8VI40 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC28■■■□□ 2.07
Trim60Q8VI40 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
Trim60Q8VI40 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
Trim60Q8VI40 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC27.94■■■□□ 2.06
Trim60Q8VI40 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
Trim60Q8VI40 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
Trim60Q8VI40 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC27.88■■■□□ 2.05
Trim60Q8VI40 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC27.85■■■□□ 2.05
Trim60Q8VI40 Zfp131-207ENSMUST00000224946 1783 ntBASIC27.83■■■□□ 2.05
Trim60Q8VI40 Rab21-202ENSMUST00000218831 843 ntBASIC27.78■■■□□ 2.04
Trim60Q8VI40 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC27.78■■■□□ 2.04
Trim60Q8VI40 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Trim60Q8VI40 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
Trim60Q8VI40 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC27.72■■■□□ 2.03
Trim60Q8VI40 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC27.69■■■□□ 2.02
Trim60Q8VI40 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC27.68■■■□□ 2.02
Trim60Q8VI40 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC27.66■■■□□ 2.02
Trim60Q8VI40 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
Trim60Q8VI40 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
Trim60Q8VI40 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC27.61■■■□□ 2.01
Trim60Q8VI40 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
Trim60Q8VI40 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
Trim60Q8VI40 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC27.6■■■□□ 2.01
Trim60Q8VI40 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC27.59■■■□□ 2.01
Trim60Q8VI40 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC27.58■■■□□ 2.01
Trim60Q8VI40 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC27.57■■■□□ 2
Trim60Q8VI40 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC27.56■■■□□ 2
Trim60Q8VI40 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC27.56■■■□□ 2
Trim60Q8VI40 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC27.55■■■□□ 2
Trim60Q8VI40 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC27.55■■■□□ 2
Trim60Q8VI40 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC27.55■■■□□ 2
Trim60Q8VI40 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC27.54■■■□□ 2
Trim60Q8VI40 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
Trim60Q8VI40 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC27.49■■□□□ 1.99
Trim60Q8VI40 Gm2415-204ENSMUST00000190235 2004 ntBASIC27.48■■□□□ 1.99
Trim60Q8VI40 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Trim60Q8VI40 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC27.46■■□□□ 1.99
Trim60Q8VI40 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
Trim60Q8VI40 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
Trim60Q8VI40 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
Trim60Q8VI40 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
Trim60Q8VI40 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC27.41■■□□□ 1.98
Trim60Q8VI40 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
Trim60Q8VI40 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
Trim60Q8VI40 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Trim60Q8VI40 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Trim60Q8VI40 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC27.36■■□□□ 1.97
Trim60Q8VI40 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC27.34■■□□□ 1.97
Trim60Q8VI40 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Trim60Q8VI40 Gm6658-202ENSMUST00000209493 1885 ntBASIC27.32■■□□□ 1.96
Trim60Q8VI40 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
Trim60Q8VI40 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC27.25■■□□□ 1.95
Trim60Q8VI40 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC27.23■■□□□ 1.95
Trim60Q8VI40 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Trim60Q8VI40 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC27.2■■□□□ 1.94
Trim60Q8VI40 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Trim60Q8VI40 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Trim60Q8VI40 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Trim60Q8VI40 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC27.15■■□□□ 1.94
Trim60Q8VI40 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC27.14■■□□□ 1.94
Trim60Q8VI40 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Trim60Q8VI40 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
Trim60Q8VI40 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC27.12■■□□□ 1.93
Trim60Q8VI40 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
Trim60Q8VI40 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC27.12■■□□□ 1.93
Trim60Q8VI40 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
Trim60Q8VI40 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC27.11■■□□□ 1.93
Trim60Q8VI40 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Trim60Q8VI40 AC153504.1-201ENSMUST00000218379 2290 ntBASIC27.06■■□□□ 1.92
Trim60Q8VI40 AL845457.1-201ENSMUST00000197244 68 ntBASIC27.05■■□□□ 1.92
Trim60Q8VI40 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC27.05■■□□□ 1.92
Trim60Q8VI40 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC27.01■■□□□ 1.91
Trim60Q8VI40 Mipep-204ENSMUST00000225043 1548 ntBASIC27■■□□□ 1.91
Trim60Q8VI40 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC26.97■■□□□ 1.91
Trim60Q8VI40 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
Trim60Q8VI40 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
Trim60Q8VI40 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC26.94■■□□□ 1.9
Trim60Q8VI40 Gm25262-201ENSMUST00000174934 133 ntBASIC26.92■■□□□ 1.9
Retrieved 100 of 76,532 protein–RNA pairs in 9.3 ms