Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC28.43■■■□□ 2.14
Trim60Q8VI40 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC28.43■■■□□ 2.14
Trim60Q8VI40 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Trim60Q8VI40 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC28.35■■■□□ 2.13
Trim60Q8VI40 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC28.33■■■□□ 2.13
Trim60Q8VI40 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC28.3■■■□□ 2.12
Trim60Q8VI40 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC28.26■■■□□ 2.11
Trim60Q8VI40 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC28.26■■■□□ 2.11
Trim60Q8VI40 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Trim60Q8VI40 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC28.21■■■□□ 2.11
Trim60Q8VI40 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC28.21■■■□□ 2.11
Trim60Q8VI40 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Trim60Q8VI40 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
Trim60Q8VI40 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
Trim60Q8VI40 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC28.1■■■□□ 2.09
Trim60Q8VI40 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC28.08■■■□□ 2.09
Trim60Q8VI40 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC28.08■■■□□ 2.09
Trim60Q8VI40 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Trim60Q8VI40 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
Trim60Q8VI40 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
Trim60Q8VI40 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Trim60Q8VI40 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC28.01■■■□□ 2.07
Trim60Q8VI40 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC28■■■□□ 2.07
Trim60Q8VI40 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
Trim60Q8VI40 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
Trim60Q8VI40 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC27.94■■■□□ 2.06
Trim60Q8VI40 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
Trim60Q8VI40 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
Trim60Q8VI40 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC27.88■■■□□ 2.05
Trim60Q8VI40 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC27.85■■■□□ 2.05
Trim60Q8VI40 Zfp131-207ENSMUST00000224946 1783 ntBASIC27.83■■■□□ 2.05
Trim60Q8VI40 Rab21-202ENSMUST00000218831 843 ntBASIC27.78■■■□□ 2.04
Trim60Q8VI40 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC27.78■■■□□ 2.04
Trim60Q8VI40 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Trim60Q8VI40 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
Trim60Q8VI40 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC27.72■■■□□ 2.03
Trim60Q8VI40 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC27.69■■■□□ 2.02
Trim60Q8VI40 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC27.68■■■□□ 2.02
Trim60Q8VI40 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC27.66■■■□□ 2.02
Trim60Q8VI40 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
Trim60Q8VI40 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
Trim60Q8VI40 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC27.61■■■□□ 2.01
Trim60Q8VI40 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
Trim60Q8VI40 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
Trim60Q8VI40 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC27.6■■■□□ 2.01
Trim60Q8VI40 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC27.59■■■□□ 2.01
Trim60Q8VI40 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC27.58■■■□□ 2.01
Trim60Q8VI40 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC27.57■■■□□ 2
Trim60Q8VI40 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC27.56■■■□□ 2
Trim60Q8VI40 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC27.56■■■□□ 2
Trim60Q8VI40 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC27.55■■■□□ 2
Trim60Q8VI40 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC27.55■■■□□ 2
Trim60Q8VI40 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC27.55■■■□□ 2
Trim60Q8VI40 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC27.54■■■□□ 2
Trim60Q8VI40 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
Trim60Q8VI40 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC27.49■■□□□ 1.99
Trim60Q8VI40 Gm2415-204ENSMUST00000190235 2004 ntBASIC27.48■■□□□ 1.99
Trim60Q8VI40 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Trim60Q8VI40 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC27.46■■□□□ 1.99
Trim60Q8VI40 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
Trim60Q8VI40 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
Trim60Q8VI40 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
Trim60Q8VI40 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
Trim60Q8VI40 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC27.41■■□□□ 1.98
Trim60Q8VI40 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
Trim60Q8VI40 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
Trim60Q8VI40 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Trim60Q8VI40 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Trim60Q8VI40 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC27.36■■□□□ 1.97
Trim60Q8VI40 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC27.34■■□□□ 1.97
Trim60Q8VI40 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Trim60Q8VI40 Gm6658-202ENSMUST00000209493 1885 ntBASIC27.32■■□□□ 1.96
Trim60Q8VI40 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
Trim60Q8VI40 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC27.25■■□□□ 1.95
Trim60Q8VI40 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC27.23■■□□□ 1.95
Trim60Q8VI40 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Trim60Q8VI40 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC27.2■■□□□ 1.94
Trim60Q8VI40 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Trim60Q8VI40 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Trim60Q8VI40 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Trim60Q8VI40 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC27.15■■□□□ 1.94
Trim60Q8VI40 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC27.14■■□□□ 1.94
Trim60Q8VI40 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Trim60Q8VI40 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
Trim60Q8VI40 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC27.12■■□□□ 1.93
Trim60Q8VI40 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
Trim60Q8VI40 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC27.12■■□□□ 1.93
Trim60Q8VI40 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
Trim60Q8VI40 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC27.11■■□□□ 1.93
Trim60Q8VI40 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Trim60Q8VI40 AC153504.1-201ENSMUST00000218379 2290 ntBASIC27.06■■□□□ 1.92
Trim60Q8VI40 AL845457.1-201ENSMUST00000197244 68 ntBASIC27.05■■□□□ 1.92
Trim60Q8VI40 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC27.05■■□□□ 1.92
Trim60Q8VI40 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC27.01■■□□□ 1.91
Trim60Q8VI40 Mipep-204ENSMUST00000225043 1548 ntBASIC27■■□□□ 1.91
Trim60Q8VI40 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC26.97■■□□□ 1.91
Trim60Q8VI40 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
Trim60Q8VI40 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
Trim60Q8VI40 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC26.94■■□□□ 1.9
Trim60Q8VI40 Gm25262-201ENSMUST00000174934 133 ntBASIC26.92■■□□□ 1.9
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms