Protein–RNA interactions for Protein: Q8VCQ6

Sgms1, Phosphatidylcholine:ceramide cholinephosphotransferase 1, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sgms1Q8VCQ6 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
Sgms1Q8VCQ6 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
Sgms1Q8VCQ6 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC30.19■■■□□ 2.42
Sgms1Q8VCQ6 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC30.16■■■□□ 2.42
Sgms1Q8VCQ6 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Sgms1Q8VCQ6 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Sgms1Q8VCQ6 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
Sgms1Q8VCQ6 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
Sgms1Q8VCQ6 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC30.05■■■□□ 2.4
Sgms1Q8VCQ6 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC30.05■■■□□ 2.4
Sgms1Q8VCQ6 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
Sgms1Q8VCQ6 Rab21-202ENSMUST00000218831 843 ntBASIC29.95■■■□□ 2.39
Sgms1Q8VCQ6 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
Sgms1Q8VCQ6 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC29.89■■■□□ 2.38
Sgms1Q8VCQ6 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC29.8■■■□□ 2.36
Sgms1Q8VCQ6 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
Sgms1Q8VCQ6 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC29.77■■■□□ 2.36
Sgms1Q8VCQ6 Gm25262-201ENSMUST00000174934 133 ntBASIC29.74■■■□□ 2.35
Sgms1Q8VCQ6 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC29.74■■■□□ 2.35
Sgms1Q8VCQ6 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC29.74■■■□□ 2.35
Sgms1Q8VCQ6 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
Sgms1Q8VCQ6 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
Sgms1Q8VCQ6 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC29.7■■■□□ 2.35
Sgms1Q8VCQ6 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC29.7■■■□□ 2.34
Sgms1Q8VCQ6 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC29.67■■■□□ 2.34
Sgms1Q8VCQ6 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
Sgms1Q8VCQ6 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC29.63■■■□□ 2.33
Sgms1Q8VCQ6 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
Sgms1Q8VCQ6 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC29.61■■■□□ 2.33
Sgms1Q8VCQ6 Zfp131-207ENSMUST00000224946 1783 ntBASIC29.6■■■□□ 2.33
Sgms1Q8VCQ6 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
Sgms1Q8VCQ6 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC29.57■■■□□ 2.32
Sgms1Q8VCQ6 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC29.56■■■□□ 2.32
Sgms1Q8VCQ6 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
Sgms1Q8VCQ6 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
Sgms1Q8VCQ6 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
Sgms1Q8VCQ6 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC29.54■■■□□ 2.32
Sgms1Q8VCQ6 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC29.52■■■□□ 2.32
Sgms1Q8VCQ6 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC29.52■■■□□ 2.32
Sgms1Q8VCQ6 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
Sgms1Q8VCQ6 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC29.5■■■□□ 2.31
Sgms1Q8VCQ6 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC29.49■■■□□ 2.31
Sgms1Q8VCQ6 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
Sgms1Q8VCQ6 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
Sgms1Q8VCQ6 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC29.41■■■□□ 2.3
Sgms1Q8VCQ6 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
Sgms1Q8VCQ6 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
Sgms1Q8VCQ6 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
Sgms1Q8VCQ6 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC29.33■■■□□ 2.29
Sgms1Q8VCQ6 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
Sgms1Q8VCQ6 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC29.33■■■□□ 2.29
Sgms1Q8VCQ6 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
Sgms1Q8VCQ6 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC29.32■■■□□ 2.28
Sgms1Q8VCQ6 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
Sgms1Q8VCQ6 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
Sgms1Q8VCQ6 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC29.26■■■□□ 2.27
Sgms1Q8VCQ6 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
Sgms1Q8VCQ6 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
Sgms1Q8VCQ6 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC29.2■■■□□ 2.26
Sgms1Q8VCQ6 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
Sgms1Q8VCQ6 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC29.15■■■□□ 2.26
Sgms1Q8VCQ6 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC29.12■■■□□ 2.25
Sgms1Q8VCQ6 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC29.11■■■□□ 2.25
Sgms1Q8VCQ6 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
Sgms1Q8VCQ6 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
Sgms1Q8VCQ6 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC29.07■■■□□ 2.24
Sgms1Q8VCQ6 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC29.05■■■□□ 2.24
Sgms1Q8VCQ6 Gm26115-201ENSMUST00000175605 87 ntBASIC29■■■□□ 2.23
Sgms1Q8VCQ6 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
Sgms1Q8VCQ6 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
Sgms1Q8VCQ6 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC28.96■■■□□ 2.23
Sgms1Q8VCQ6 AL845457.1-201ENSMUST00000197244 68 ntBASIC28.94■■■□□ 2.22
Sgms1Q8VCQ6 Gm2415-204ENSMUST00000190235 2004 ntBASIC28.94■■■□□ 2.22
Sgms1Q8VCQ6 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
Sgms1Q8VCQ6 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
Sgms1Q8VCQ6 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
Sgms1Q8VCQ6 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
Sgms1Q8VCQ6 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC28.87■■■□□ 2.21
Sgms1Q8VCQ6 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
Sgms1Q8VCQ6 Gm8109-201ENSMUST00000194076 746 ntBASIC28.85■■■□□ 2.21
Sgms1Q8VCQ6 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC28.85■■■□□ 2.21
Sgms1Q8VCQ6 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC28.85■■■□□ 2.21
Sgms1Q8VCQ6 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
Sgms1Q8VCQ6 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC28.82■■■□□ 2.2
Sgms1Q8VCQ6 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC28.82■■■□□ 2.2
Sgms1Q8VCQ6 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
Sgms1Q8VCQ6 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC28.81■■■□□ 2.2
Sgms1Q8VCQ6 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC28.8■■■□□ 2.2
Sgms1Q8VCQ6 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC28.79■■■□□ 2.2
Sgms1Q8VCQ6 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
Sgms1Q8VCQ6 Mipep-204ENSMUST00000225043 1548 ntBASIC28.74■■■□□ 2.19
Sgms1Q8VCQ6 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
Sgms1Q8VCQ6 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
Sgms1Q8VCQ6 Gm6658-202ENSMUST00000209493 1885 ntBASIC28.71■■■□□ 2.19
Sgms1Q8VCQ6 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
Sgms1Q8VCQ6 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
Sgms1Q8VCQ6 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Sgms1Q8VCQ6 Gm17082-201ENSMUST00000166043 1091 ntBASIC28.64■■■□□ 2.18
Sgms1Q8VCQ6 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC28.62■■■□□ 2.17
Sgms1Q8VCQ6 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC28.61■■■□□ 2.17
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms