Protein–RNA interactions for Protein: Q8VCC8

Rapgef3, Rap guanine nucleotide exchange factor 3, mousemouse

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rapgef3Q8VCC8 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC40.45■■■■■ 4.07
Rapgef3Q8VCC8 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC40.45■■■■■ 4.07
Rapgef3Q8VCC8 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC40.42■■■■■ 4.06
Rapgef3Q8VCC8 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC40.34■■■■■ 4.05
Rapgef3Q8VCC8 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC40.31■■■■■ 4.04
Rapgef3Q8VCC8 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC40.3■■■■■ 4.04
Rapgef3Q8VCC8 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC40.3■■■■■ 4.04
Rapgef3Q8VCC8 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC40.28■■■■■ 4.04
Rapgef3Q8VCC8 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC40.26■■■■■ 4.04
Rapgef3Q8VCC8 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC40.15■■■■■ 4.02
Rapgef3Q8VCC8 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC40.15■■■■■ 4.02
Rapgef3Q8VCC8 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC39.97■■■■□ 3.99
Rapgef3Q8VCC8 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC39.94■■■■□ 3.98
Rapgef3Q8VCC8 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC39.91■■■■□ 3.98
Rapgef3Q8VCC8 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC39.89■■■■□ 3.98
Rapgef3Q8VCC8 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC39.87■■■■□ 3.97
Rapgef3Q8VCC8 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC39.83■■■■□ 3.97
Rapgef3Q8VCC8 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC39.83■■■■□ 3.97
Rapgef3Q8VCC8 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC39.82■■■■□ 3.96
Rapgef3Q8VCC8 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC39.81■■■■□ 3.96
Rapgef3Q8VCC8 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC39.81■■■■□ 3.96
Rapgef3Q8VCC8 Psd-208ENSMUST00000224556 2034 ntBASIC39.79■■■■□ 3.96
Rapgef3Q8VCC8 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC39.69■■■■□ 3.94
Rapgef3Q8VCC8 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC39.66■■■■□ 3.94
Rapgef3Q8VCC8 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC39.65■■■■□ 3.94
Rapgef3Q8VCC8 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC39.62■■■■□ 3.93
Rapgef3Q8VCC8 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC39.59■■■■□ 3.93
Rapgef3Q8VCC8 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC39.56■■■■□ 3.92
Rapgef3Q8VCC8 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC39.54■■■■□ 3.92
Rapgef3Q8VCC8 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC39.5■■■■□ 3.91
Rapgef3Q8VCC8 AC166822.3-201ENSMUST00000227394 661 ntBASIC39.46■■■■□ 3.91
Rapgef3Q8VCC8 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC39.42■■■■□ 3.9
Rapgef3Q8VCC8 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC39.41■■■■□ 3.9
Rapgef3Q8VCC8 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC39.4■■■■□ 3.9
Rapgef3Q8VCC8 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC39.38■■■■□ 3.89
Rapgef3Q8VCC8 Tdp2-203ENSMUST00000223804 1136 ntBASIC39.36■■■■□ 3.89
Rapgef3Q8VCC8 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC39.35■■■■□ 3.89
Rapgef3Q8VCC8 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC39.34■■■■□ 3.89
Rapgef3Q8VCC8 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC39.28■■■■□ 3.88
Rapgef3Q8VCC8 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC39.26■■■■□ 3.88
Rapgef3Q8VCC8 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC39.25■■■■□ 3.87
Rapgef3Q8VCC8 Gm16148-201ENSMUST00000119653 893 ntBASIC39.2■■■■□ 3.87
Rapgef3Q8VCC8 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC39.17■■■■□ 3.86
Rapgef3Q8VCC8 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC39.16■■■■□ 3.86
Rapgef3Q8VCC8 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC39.12■■■■□ 3.85
Rapgef3Q8VCC8 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC39.09■■■■□ 3.85
Rapgef3Q8VCC8 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC39.09■■■■□ 3.85
Rapgef3Q8VCC8 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC39.08■■■■□ 3.85
Rapgef3Q8VCC8 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC39.08■■■■□ 3.85
Rapgef3Q8VCC8 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC39.08■■■■□ 3.85
Rapgef3Q8VCC8 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC39.07■■■■□ 3.85
Rapgef3Q8VCC8 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC39.07■■■■□ 3.84
Rapgef3Q8VCC8 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC39.06■■■■□ 3.84
Rapgef3Q8VCC8 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC39.03■■■■□ 3.84
Rapgef3Q8VCC8 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC39.03■■■■□ 3.84
Rapgef3Q8VCC8 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC39■■■■□ 3.83
Rapgef3Q8VCC8 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC38.95■■■■□ 3.83
Rapgef3Q8VCC8 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC38.94■■■■□ 3.82
Rapgef3Q8VCC8 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC38.93■■■■□ 3.82
Rapgef3Q8VCC8 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC38.89■■■■□ 3.82
Rapgef3Q8VCC8 Gm5987-201ENSMUST00000196433 1151 ntBASIC38.88■■■■□ 3.81
Rapgef3Q8VCC8 AL845457.1-201ENSMUST00000197244 68 ntBASIC38.88■■■■□ 3.81
Rapgef3Q8VCC8 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC38.87■■■■□ 3.81
Rapgef3Q8VCC8 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC38.82■■■■□ 3.81
Rapgef3Q8VCC8 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC38.8■■■■□ 3.8
Rapgef3Q8VCC8 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC38.8■■■■□ 3.8
Rapgef3Q8VCC8 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC38.8■■■■□ 3.8
Rapgef3Q8VCC8 Gm45855-201ENSMUST00000212546 880 ntBASIC38.77■■■■□ 3.8
Rapgef3Q8VCC8 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC38.77■■■■□ 3.8
Rapgef3Q8VCC8 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC38.76■■■■□ 3.8
Rapgef3Q8VCC8 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC38.73■■■■□ 3.79
Rapgef3Q8VCC8 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC38.73■■■■□ 3.79
Rapgef3Q8VCC8 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC38.66■■■■□ 3.78
Rapgef3Q8VCC8 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC38.66■■■■□ 3.78
Rapgef3Q8VCC8 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC38.63■■■■□ 3.78
Rapgef3Q8VCC8 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC38.63■■■■□ 3.77
Rapgef3Q8VCC8 Gm42596-201ENSMUST00000196305 1958 ntBASIC38.61■■■■□ 3.77
Rapgef3Q8VCC8 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC38.6■■■■□ 3.77
Rapgef3Q8VCC8 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC38.59■■■■□ 3.77
Rapgef3Q8VCC8 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC38.58■■■■□ 3.77
Rapgef3Q8VCC8 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC38.58■■■■□ 3.77
Rapgef3Q8VCC8 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC38.55■■■■□ 3.76
Rapgef3Q8VCC8 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC38.55■■■■□ 3.76
Rapgef3Q8VCC8 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC38.54■■■■□ 3.76
Rapgef3Q8VCC8 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC38.54■■■■□ 3.76
Rapgef3Q8VCC8 Peli2-204ENSMUST00000226513 1320 ntBASIC38.52■■■■□ 3.76
Rapgef3Q8VCC8 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC38.49■■■■□ 3.75
Rapgef3Q8VCC8 Gm10524-201ENSMUST00000181931 1893 ntBASIC38.47■■■■□ 3.75
Rapgef3Q8VCC8 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC38.47■■■■□ 3.75
Rapgef3Q8VCC8 CT025624.2-201ENSMUST00000223609 1909 ntBASIC38.46■■■■□ 3.75
Rapgef3Q8VCC8 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC38.44■■■■□ 3.74
Rapgef3Q8VCC8 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC38.41■■■■□ 3.74
Rapgef3Q8VCC8 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC38.41■■■■□ 3.74
Rapgef3Q8VCC8 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC38.39■■■■□ 3.74
Rapgef3Q8VCC8 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC38.37■■■■□ 3.73
Rapgef3Q8VCC8 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC38.36■■■■□ 3.73
Rapgef3Q8VCC8 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC38.35■■■■□ 3.73
Rapgef3Q8VCC8 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC38.3■■■■□ 3.72
Rapgef3Q8VCC8 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC38.29■■■■□ 3.72
Rapgef3Q8VCC8 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC38.29■■■■□ 3.72
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms