Protein–RNA interactions for Protein: Q8VC82

Rhbdl1, Rhomboid-related protein 1, mousemouse

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rhbdl1Q8VC82 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC25.1■■□□□ 1.61
Rhbdl1Q8VC82 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC25.09■■□□□ 1.61
Rhbdl1Q8VC82 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC25.07■■□□□ 1.6
Rhbdl1Q8VC82 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Rhbdl1Q8VC82 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC25■■□□□ 1.59
Rhbdl1Q8VC82 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC24.97■■□□□ 1.59
Rhbdl1Q8VC82 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC24.93■■□□□ 1.58
Rhbdl1Q8VC82 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC24.92■■□□□ 1.58
Rhbdl1Q8VC82 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Rhbdl1Q8VC82 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC24.88■■□□□ 1.57
Rhbdl1Q8VC82 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Rhbdl1Q8VC82 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC24.86■■□□□ 1.57
Rhbdl1Q8VC82 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
Rhbdl1Q8VC82 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Rhbdl1Q8VC82 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC24.8■■□□□ 1.56
Rhbdl1Q8VC82 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Rhbdl1Q8VC82 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC24.79■■□□□ 1.56
Rhbdl1Q8VC82 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Rhbdl1Q8VC82 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Rhbdl1Q8VC82 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC24.75■■□□□ 1.55
Rhbdl1Q8VC82 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Rhbdl1Q8VC82 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC24.73■■□□□ 1.55
Rhbdl1Q8VC82 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC24.72■■□□□ 1.55
Rhbdl1Q8VC82 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Rhbdl1Q8VC82 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Rhbdl1Q8VC82 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Rhbdl1Q8VC82 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC24.64■■□□□ 1.54
Rhbdl1Q8VC82 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Rhbdl1Q8VC82 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC24.61■■□□□ 1.53
Rhbdl1Q8VC82 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC24.56■■□□□ 1.52
Rhbdl1Q8VC82 Zfp131-207ENSMUST00000224946 1783 ntBASIC24.55■■□□□ 1.52
Rhbdl1Q8VC82 Rab21-202ENSMUST00000218831 843 ntBASIC24.53■■□□□ 1.52
Rhbdl1Q8VC82 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Rhbdl1Q8VC82 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC24.5■■□□□ 1.51
Rhbdl1Q8VC82 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Rhbdl1Q8VC82 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC24.45■■□□□ 1.5
Rhbdl1Q8VC82 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
Rhbdl1Q8VC82 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC24.44■■□□□ 1.5
Rhbdl1Q8VC82 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
Rhbdl1Q8VC82 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Rhbdl1Q8VC82 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Rhbdl1Q8VC82 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC24.37■■□□□ 1.49
Rhbdl1Q8VC82 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Rhbdl1Q8VC82 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC24.36■■□□□ 1.49
Rhbdl1Q8VC82 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Rhbdl1Q8VC82 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC24.34■■□□□ 1.49
Rhbdl1Q8VC82 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
Rhbdl1Q8VC82 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC24.33■■□□□ 1.49
Rhbdl1Q8VC82 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Rhbdl1Q8VC82 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
Rhbdl1Q8VC82 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Rhbdl1Q8VC82 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC24.31■■□□□ 1.48
Rhbdl1Q8VC82 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
Rhbdl1Q8VC82 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Rhbdl1Q8VC82 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Rhbdl1Q8VC82 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC24.27■■□□□ 1.48
Rhbdl1Q8VC82 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC24.27■■□□□ 1.48
Rhbdl1Q8VC82 Gm2415-204ENSMUST00000190235 2004 ntBASIC24.23■■□□□ 1.47
Rhbdl1Q8VC82 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Rhbdl1Q8VC82 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Rhbdl1Q8VC82 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Rhbdl1Q8VC82 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Rhbdl1Q8VC82 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Rhbdl1Q8VC82 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC24.21■■□□□ 1.47
Rhbdl1Q8VC82 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Rhbdl1Q8VC82 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
Rhbdl1Q8VC82 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Rhbdl1Q8VC82 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
Rhbdl1Q8VC82 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Rhbdl1Q8VC82 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC24.14■■□□□ 1.45
Rhbdl1Q8VC82 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Rhbdl1Q8VC82 Gm6658-202ENSMUST00000209493 1885 ntBASIC24.09■■□□□ 1.45
Rhbdl1Q8VC82 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
Rhbdl1Q8VC82 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC24.08■■□□□ 1.45
Rhbdl1Q8VC82 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC24.02■■□□□ 1.44
Rhbdl1Q8VC82 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC24.02■■□□□ 1.44
Rhbdl1Q8VC82 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Rhbdl1Q8VC82 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Rhbdl1Q8VC82 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Rhbdl1Q8VC82 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC23.95■■□□□ 1.42
Rhbdl1Q8VC82 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Rhbdl1Q8VC82 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Rhbdl1Q8VC82 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Rhbdl1Q8VC82 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Rhbdl1Q8VC82 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC23.93■■□□□ 1.42
Rhbdl1Q8VC82 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Rhbdl1Q8VC82 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Rhbdl1Q8VC82 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
Rhbdl1Q8VC82 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
Rhbdl1Q8VC82 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
Rhbdl1Q8VC82 AL845457.1-201ENSMUST00000197244 68 ntBASIC23.88■■□□□ 1.41
Rhbdl1Q8VC82 AC153504.1-201ENSMUST00000218379 2290 ntBASIC23.87■■□□□ 1.41
Rhbdl1Q8VC82 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
Rhbdl1Q8VC82 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC23.84■■□□□ 1.41
Rhbdl1Q8VC82 Mipep-204ENSMUST00000225043 1548 ntBASIC23.83■■□□□ 1.41
Rhbdl1Q8VC82 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Rhbdl1Q8VC82 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Rhbdl1Q8VC82 Gm25262-201ENSMUST00000174934 133 ntBASIC23.79■■□□□ 1.4
Rhbdl1Q8VC82 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Rhbdl1Q8VC82 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms