Protein–RNA interactions for Protein: Q8R420

Abca3, ATP-binding cassette sub-family A member 3, mousemouse

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca3Q8R420 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC36,47■■■■□ 3,43
Abca3Q8R420 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC36,47■■■■□ 3,43
Abca3Q8R420 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC36,46■■■■□ 3,43
Abca3Q8R420 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC36,42■■■■□ 3,42
Abca3Q8R420 Gm27322-201ENSMUST00000184007 104 ntBASIC36,39■■■■□ 3,42
Abca3Q8R420 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC36,36■■■■□ 3,41
Abca3Q8R420 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC36,27■■■■□ 3,4
Abca3Q8R420 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC36,25■■■■□ 3,39
Abca3Q8R420 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC36,24■■■■□ 3,39
Abca3Q8R420 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC36,22■■■■□ 3,39
Abca3Q8R420 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC36,21■■■■□ 3,39
Abca3Q8R420 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC36,19■■■■□ 3,38
Abca3Q8R420 Zfp131-205ENSMUST00000223812 663 ntBASIC36,18■■■■□ 3,38
Abca3Q8R420 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC36,16■■■■□ 3,38
Abca3Q8R420 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC36,12■■■■□ 3,37
Abca3Q8R420 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC36,09■■■■□ 3,37
Abca3Q8R420 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC36,01■■■■□ 3,36
Abca3Q8R420 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC35,96■■■■□ 3,35
Abca3Q8R420 Gm42596-201ENSMUST00000196305 1958 ntBASIC35,94■■■■□ 3,34
Abca3Q8R420 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC35,93■■■■□ 3,34
Abca3Q8R420 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC35,93■■■■□ 3,34
Abca3Q8R420 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC35,93■■■■□ 3,34
Abca3Q8R420 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC35,91■■■■□ 3,34
Abca3Q8R420 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC35,91■■■■□ 3,34
Abca3Q8R420 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC35,9■■■■□ 3,34
Abca3Q8R420 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC35,84■■■■□ 3,33
Abca3Q8R420 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC35,77■■■■□ 3,32
Abca3Q8R420 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC35,74■■■■□ 3,31
Abca3Q8R420 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC35,73■■■■□ 3,31
Abca3Q8R420 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC35,73■■■■□ 3,31
Abca3Q8R420 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC35,73■■■■□ 3,31
Abca3Q8R420 AC166822.3-201ENSMUST00000227394 661 ntBASIC35,71■■■■□ 3,31
Abca3Q8R420 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC35,7■■■■□ 3,31
Abca3Q8R420 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC35,69■■■■□ 3,3
Abca3Q8R420 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC35,66■■■■□ 3,3
Abca3Q8R420 Gm10524-201ENSMUST00000181931 1893 ntBASIC35,63■■■■□ 3,29
Abca3Q8R420 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC35,63■■■■□ 3,29
Abca3Q8R420 CT025624.2-201ENSMUST00000223609 1909 ntBASIC35,61■■■■□ 3,29
Abca3Q8R420 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC35,54■■■■□ 3,28
Abca3Q8R420 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC35,54■■■■□ 3,28
Abca3Q8R420 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC35,53■■■■□ 3,28
Abca3Q8R420 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC35,52■■■■□ 3,28
Abca3Q8R420 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC35,52■■■■□ 3,28
Abca3Q8R420 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC35,52■■■■□ 3,28
Abca3Q8R420 AL845457.1-201ENSMUST00000197244 68 ntBASIC35,52■■■■□ 3,28
Abca3Q8R420 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC35,5■■■■□ 3,27
Abca3Q8R420 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC35,48■■■■□ 3,27
Abca3Q8R420 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC35,46■■■■□ 3,27
Abca3Q8R420 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC35,45■■■■□ 3,27
Abca3Q8R420 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC35,43■■■■□ 3,26
Abca3Q8R420 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC35,42■■■■□ 3,26
Abca3Q8R420 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC35,39■■■■□ 3,26
Abca3Q8R420 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC35,39■■■■□ 3,26
Abca3Q8R420 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC35,38■■■■□ 3,25
Abca3Q8R420 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC35,38■■■■□ 3,25
Abca3Q8R420 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC35,36■■■■□ 3,25
Abca3Q8R420 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC35,33■■■■□ 3,25
Abca3Q8R420 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC35,3■■■■□ 3,24
Abca3Q8R420 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC35,29■■■■□ 3,24
Abca3Q8R420 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC35,28■■■■□ 3,24
Abca3Q8R420 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC35,27■■■■□ 3,24
Abca3Q8R420 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC35,27■■■■□ 3,24
Abca3Q8R420 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC35,24■■■■□ 3,23
Abca3Q8R420 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC35,23■■■■□ 3,23
Abca3Q8R420 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC35,14■■■■□ 3,22
Abca3Q8R420 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC35,05■■■■□ 3,2
Abca3Q8R420 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC35,03■■■■□ 3,2
Abca3Q8R420 Gm16148-201ENSMUST00000119653 893 ntBASIC35,01■■■■□ 3,19
Abca3Q8R420 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC34,98■■■■□ 3,19
Abca3Q8R420 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC34,98■■■■□ 3,19
Abca3Q8R420 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC34,97■■■■□ 3,19
Abca3Q8R420 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC34,95■■■■□ 3,19
Abca3Q8R420 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC34,94■■■■□ 3,18
Abca3Q8R420 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC34,94■■■■□ 3,18
Abca3Q8R420 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC34,94■■■■□ 3,18
Abca3Q8R420 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC34,92■■■■□ 3,18
Abca3Q8R420 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC34,89■■■■□ 3,18
Abca3Q8R420 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC34,87■■■■□ 3,17
Abca3Q8R420 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC34,85■■■■□ 3,17
Abca3Q8R420 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC34,85■■■■□ 3,17
Abca3Q8R420 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC34,81■■■■□ 3,16
Abca3Q8R420 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC34,8■■■■□ 3,16
Abca3Q8R420 Zfp131-207ENSMUST00000224946 1783 ntBASIC34,79■■■■□ 3,16
Abca3Q8R420 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC34,77■■■■□ 3,16
Abca3Q8R420 Peli2-204ENSMUST00000226513 1320 ntBASIC34,76■■■■□ 3,15
Abca3Q8R420 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC34,75■■■■□ 3,15
Abca3Q8R420 Tdp2-203ENSMUST00000223804 1136 ntBASIC34,75■■■■□ 3,15
Abca3Q8R420 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC34,73■■■■□ 3,15
Abca3Q8R420 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC34,72■■■■□ 3,15
Abca3Q8R420 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC34,72■■■■□ 3,15
Abca3Q8R420 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC34,72■■■■□ 3,15
Abca3Q8R420 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC34,72■■■■□ 3,15
Abca3Q8R420 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC34,69■■■■□ 3,14
Abca3Q8R420 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC34,69■■■■□ 3,14
Abca3Q8R420 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC34,67■■■■□ 3,14
Abca3Q8R420 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC34,67■■■■□ 3,14
Abca3Q8R420 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC34,66■■■■□ 3,14
Abca3Q8R420 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC34,64■■■■□ 3,14
Abca3Q8R420 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC34,61■■■■□ 3,13
Abca3Q8R420 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC34,61■■■■□ 3,13
Retrieved 100 of 76,532 protein–RNA pairs in 11,3 ms