Protein–RNA interactions for Protein: Q8R420

Abca3, ATP-binding cassette sub-family A member 3, mousemouse

Predictions only

Length 1,704 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca3Q8R420 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC36.47■■■■□ 3.43
Abca3Q8R420 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC36.47■■■■□ 3.43
Abca3Q8R420 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC36.46■■■■□ 3.43
Abca3Q8R420 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC36.42■■■■□ 3.42
Abca3Q8R420 Gm27322-201ENSMUST00000184007 104 ntBASIC36.39■■■■□ 3.42
Abca3Q8R420 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC36.36■■■■□ 3.41
Abca3Q8R420 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC36.27■■■■□ 3.4
Abca3Q8R420 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC36.25■■■■□ 3.39
Abca3Q8R420 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC36.24■■■■□ 3.39
Abca3Q8R420 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC36.22■■■■□ 3.39
Abca3Q8R420 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC36.21■■■■□ 3.39
Abca3Q8R420 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC36.19■■■■□ 3.38
Abca3Q8R420 Zfp131-205ENSMUST00000223812 663 ntBASIC36.18■■■■□ 3.38
Abca3Q8R420 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC36.16■■■■□ 3.38
Abca3Q8R420 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC36.12■■■■□ 3.37
Abca3Q8R420 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC36.09■■■■□ 3.37
Abca3Q8R420 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC36.01■■■■□ 3.36
Abca3Q8R420 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC35.96■■■■□ 3.35
Abca3Q8R420 Gm42596-201ENSMUST00000196305 1958 ntBASIC35.94■■■■□ 3.34
Abca3Q8R420 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC35.93■■■■□ 3.34
Abca3Q8R420 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC35.93■■■■□ 3.34
Abca3Q8R420 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC35.93■■■■□ 3.34
Abca3Q8R420 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC35.91■■■■□ 3.34
Abca3Q8R420 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC35.91■■■■□ 3.34
Abca3Q8R420 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC35.9■■■■□ 3.34
Abca3Q8R420 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC35.84■■■■□ 3.33
Abca3Q8R420 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC35.77■■■■□ 3.32
Abca3Q8R420 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC35.74■■■■□ 3.31
Abca3Q8R420 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC35.73■■■■□ 3.31
Abca3Q8R420 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC35.73■■■■□ 3.31
Abca3Q8R420 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC35.73■■■■□ 3.31
Abca3Q8R420 AC166822.3-201ENSMUST00000227394 661 ntBASIC35.71■■■■□ 3.31
Abca3Q8R420 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC35.7■■■■□ 3.31
Abca3Q8R420 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC35.69■■■■□ 3.3
Abca3Q8R420 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC35.66■■■■□ 3.3
Abca3Q8R420 Gm10524-201ENSMUST00000181931 1893 ntBASIC35.63■■■■□ 3.29
Abca3Q8R420 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC35.63■■■■□ 3.29
Abca3Q8R420 CT025624.2-201ENSMUST00000223609 1909 ntBASIC35.61■■■■□ 3.29
Abca3Q8R420 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC35.54■■■■□ 3.28
Abca3Q8R420 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC35.54■■■■□ 3.28
Abca3Q8R420 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC35.53■■■■□ 3.28
Abca3Q8R420 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC35.52■■■■□ 3.28
Abca3Q8R420 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC35.52■■■■□ 3.28
Abca3Q8R420 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC35.52■■■■□ 3.28
Abca3Q8R420 AL845457.1-201ENSMUST00000197244 68 ntBASIC35.52■■■■□ 3.28
Abca3Q8R420 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC35.5■■■■□ 3.27
Abca3Q8R420 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC35.48■■■■□ 3.27
Abca3Q8R420 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC35.46■■■■□ 3.27
Abca3Q8R420 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC35.45■■■■□ 3.27
Abca3Q8R420 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC35.43■■■■□ 3.26
Abca3Q8R420 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC35.42■■■■□ 3.26
Abca3Q8R420 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC35.39■■■■□ 3.26
Abca3Q8R420 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC35.39■■■■□ 3.26
Abca3Q8R420 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC35.38■■■■□ 3.25
Abca3Q8R420 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC35.38■■■■□ 3.25
Abca3Q8R420 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC35.36■■■■□ 3.25
Abca3Q8R420 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC35.33■■■■□ 3.25
Abca3Q8R420 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC35.3■■■■□ 3.24
Abca3Q8R420 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC35.29■■■■□ 3.24
Abca3Q8R420 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC35.28■■■■□ 3.24
Abca3Q8R420 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC35.27■■■■□ 3.24
Abca3Q8R420 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC35.27■■■■□ 3.24
Abca3Q8R420 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC35.24■■■■□ 3.23
Abca3Q8R420 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC35.23■■■■□ 3.23
Abca3Q8R420 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC35.14■■■■□ 3.22
Abca3Q8R420 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC35.05■■■■□ 3.2
Abca3Q8R420 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC35.03■■■■□ 3.2
Abca3Q8R420 Gm16148-201ENSMUST00000119653 893 ntBASIC35.01■■■■□ 3.19
Abca3Q8R420 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC34.98■■■■□ 3.19
Abca3Q8R420 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC34.98■■■■□ 3.19
Abca3Q8R420 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC34.97■■■■□ 3.19
Abca3Q8R420 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC34.95■■■■□ 3.19
Abca3Q8R420 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC34.94■■■■□ 3.18
Abca3Q8R420 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC34.94■■■■□ 3.18
Abca3Q8R420 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC34.94■■■■□ 3.18
Abca3Q8R420 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC34.92■■■■□ 3.18
Abca3Q8R420 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC34.89■■■■□ 3.18
Abca3Q8R420 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC34.87■■■■□ 3.17
Abca3Q8R420 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC34.85■■■■□ 3.17
Abca3Q8R420 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC34.85■■■■□ 3.17
Abca3Q8R420 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC34.81■■■■□ 3.16
Abca3Q8R420 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC34.8■■■■□ 3.16
Abca3Q8R420 Zfp131-207ENSMUST00000224946 1783 ntBASIC34.79■■■■□ 3.16
Abca3Q8R420 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC34.77■■■■□ 3.16
Abca3Q8R420 Peli2-204ENSMUST00000226513 1320 ntBASIC34.76■■■■□ 3.15
Abca3Q8R420 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC34.75■■■■□ 3.15
Abca3Q8R420 Tdp2-203ENSMUST00000223804 1136 ntBASIC34.75■■■■□ 3.15
Abca3Q8R420 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC34.73■■■■□ 3.15
Abca3Q8R420 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC34.72■■■■□ 3.15
Abca3Q8R420 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC34.72■■■■□ 3.15
Abca3Q8R420 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC34.72■■■■□ 3.15
Abca3Q8R420 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC34.72■■■■□ 3.15
Abca3Q8R420 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC34.69■■■■□ 3.14
Abca3Q8R420 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC34.69■■■■□ 3.14
Abca3Q8R420 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC34.67■■■■□ 3.14
Abca3Q8R420 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC34.67■■■■□ 3.14
Abca3Q8R420 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC34.66■■■■□ 3.14
Abca3Q8R420 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC34.64■■■■□ 3.14
Abca3Q8R420 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC34.61■■■■□ 3.13
Abca3Q8R420 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC34.61■■■■□ 3.13
Retrieved 100 of 76,532 protein–RNA pairs in 8.2 ms