Protein–RNA interactions for Protein: Q8R2U7

Lrrc42, Leucine-rich repeat-containing protein 42, mousemouse

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc42Q8R2U7 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC28.56■■■□□ 2.16
Lrrc42Q8R2U7 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
Lrrc42Q8R2U7 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC28.55■■■□□ 2.16
Lrrc42Q8R2U7 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Lrrc42Q8R2U7 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC28.49■■■□□ 2.15
Lrrc42Q8R2U7 Gm25262-201ENSMUST00000174934 133 ntBASIC28.43■■■□□ 2.14
Lrrc42Q8R2U7 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC28.4■■■□□ 2.14
Lrrc42Q8R2U7 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC28.38■■■□□ 2.13
Lrrc42Q8R2U7 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC28.37■■■□□ 2.13
Lrrc42Q8R2U7 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Lrrc42Q8R2U7 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
Lrrc42Q8R2U7 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC28.31■■■□□ 2.12
Lrrc42Q8R2U7 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC28.31■■■□□ 2.12
Lrrc42Q8R2U7 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Lrrc42Q8R2U7 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC28.28■■■□□ 2.12
Lrrc42Q8R2U7 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC28.28■■■□□ 2.12
Lrrc42Q8R2U7 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Lrrc42Q8R2U7 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC28.25■■■□□ 2.11
Lrrc42Q8R2U7 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Lrrc42Q8R2U7 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC28.23■■■□□ 2.11
Lrrc42Q8R2U7 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Lrrc42Q8R2U7 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Lrrc42Q8R2U7 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Lrrc42Q8R2U7 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC28.14■■■□□ 2.1
Lrrc42Q8R2U7 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
Lrrc42Q8R2U7 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Lrrc42Q8R2U7 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
Lrrc42Q8R2U7 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
Lrrc42Q8R2U7 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
Lrrc42Q8R2U7 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
Lrrc42Q8R2U7 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Lrrc42Q8R2U7 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC28.02■■■□□ 2.08
Lrrc42Q8R2U7 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
Lrrc42Q8R2U7 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
Lrrc42Q8R2U7 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC27.99■■■□□ 2.07
Lrrc42Q8R2U7 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC27.99■■■□□ 2.07
Lrrc42Q8R2U7 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC27.98■■■□□ 2.07
Lrrc42Q8R2U7 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC27.97■■■□□ 2.07
Lrrc42Q8R2U7 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
Lrrc42Q8R2U7 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC27.94■■■□□ 2.06
Lrrc42Q8R2U7 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC27.94■■■□□ 2.06
Lrrc42Q8R2U7 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
Lrrc42Q8R2U7 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC27.91■■■□□ 2.06
Lrrc42Q8R2U7 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
Lrrc42Q8R2U7 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
Lrrc42Q8R2U7 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC27.81■■■□□ 2.04
Lrrc42Q8R2U7 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC27.79■■■□□ 2.04
Lrrc42Q8R2U7 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
Lrrc42Q8R2U7 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Lrrc42Q8R2U7 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC27.73■■■□□ 2.03
Lrrc42Q8R2U7 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
Lrrc42Q8R2U7 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Lrrc42Q8R2U7 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Lrrc42Q8R2U7 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
Lrrc42Q8R2U7 Zxda-201ENSMUST00000117281 2621 ntBASIC27.63■■■□□ 2.01
Lrrc42Q8R2U7 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
Lrrc42Q8R2U7 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
Lrrc42Q8R2U7 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC27.61■■■□□ 2.01
Lrrc42Q8R2U7 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC27.6■■■□□ 2.01
Lrrc42Q8R2U7 Gm26115-201ENSMUST00000175605 87 ntBASIC27.6■■■□□ 2.01
Lrrc42Q8R2U7 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC27.59■■■□□ 2.01
Lrrc42Q8R2U7 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
Lrrc42Q8R2U7 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC27.54■■■□□ 2
Lrrc42Q8R2U7 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
Lrrc42Q8R2U7 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
Lrrc42Q8R2U7 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
Lrrc42Q8R2U7 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
Lrrc42Q8R2U7 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC27.48■■□□□ 1.99
Lrrc42Q8R2U7 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Lrrc42Q8R2U7 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Lrrc42Q8R2U7 AC153504.1-201ENSMUST00000218379 2290 ntBASIC27.46■■□□□ 1.99
Lrrc42Q8R2U7 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Lrrc42Q8R2U7 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC27.45■■□□□ 1.99
Lrrc42Q8R2U7 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
Lrrc42Q8R2U7 Gm17082-201ENSMUST00000166043 1091 ntBASIC27.44■■□□□ 1.98
Lrrc42Q8R2U7 Gm8109-201ENSMUST00000194076 746 ntBASIC27.44■■□□□ 1.98
Lrrc42Q8R2U7 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
Lrrc42Q8R2U7 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC27.39■■□□□ 1.98
Lrrc42Q8R2U7 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Lrrc42Q8R2U7 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Lrrc42Q8R2U7 Zfp131-207ENSMUST00000224946 1783 ntBASIC27.35■■□□□ 1.97
Lrrc42Q8R2U7 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC27.34■■□□□ 1.97
Lrrc42Q8R2U7 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Lrrc42Q8R2U7 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC27.33■■□□□ 1.96
Lrrc42Q8R2U7 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Lrrc42Q8R2U7 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Lrrc42Q8R2U7 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC27.32■■□□□ 1.96
Lrrc42Q8R2U7 Gm27322-201ENSMUST00000184007 104 ntBASIC27.32■■□□□ 1.96
Lrrc42Q8R2U7 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC27.29■■□□□ 1.96
Lrrc42Q8R2U7 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC27.25■■□□□ 1.95
Lrrc42Q8R2U7 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Lrrc42Q8R2U7 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
Lrrc42Q8R2U7 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC27.2■■□□□ 1.94
Lrrc42Q8R2U7 AL845457.1-201ENSMUST00000197244 68 ntBASIC27.19■■□□□ 1.94
Lrrc42Q8R2U7 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Lrrc42Q8R2U7 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
Lrrc42Q8R2U7 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Lrrc42Q8R2U7 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Lrrc42Q8R2U7 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
Lrrc42Q8R2U7 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms