Protein–RNA interactions for Protein: Q8R2D4

Vmn1r6, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r6Q8R2D4 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC25.4■■□□□ 1.66
Vmn1r6Q8R2D4 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Vmn1r6Q8R2D4 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Vmn1r6Q8R2D4 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Vmn1r6Q8R2D4 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Vmn1r6Q8R2D4 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC25.35■■□□□ 1.65
Vmn1r6Q8R2D4 Gm27325-201ENSMUST00000175467 74 ntBASIC25.31■■□□□ 1.64
Vmn1r6Q8R2D4 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Vmn1r6Q8R2D4 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC25.22■■□□□ 1.63
Vmn1r6Q8R2D4 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC25.2■■□□□ 1.62
Vmn1r6Q8R2D4 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
Vmn1r6Q8R2D4 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC25.16■■□□□ 1.62
Vmn1r6Q8R2D4 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
Vmn1r6Q8R2D4 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Vmn1r6Q8R2D4 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Vmn1r6Q8R2D4 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Vmn1r6Q8R2D4 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC25.09■■□□□ 1.61
Vmn1r6Q8R2D4 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Vmn1r6Q8R2D4 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC25.02■■□□□ 1.6
Vmn1r6Q8R2D4 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Vmn1r6Q8R2D4 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Vmn1r6Q8R2D4 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Vmn1r6Q8R2D4 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC25■■□□□ 1.59
Vmn1r6Q8R2D4 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
Vmn1r6Q8R2D4 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Vmn1r6Q8R2D4 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC24.97■■□□□ 1.59
Vmn1r6Q8R2D4 Gm25238-201ENSMUST00000174914 89 ntBASIC24.94■■□□□ 1.58
Vmn1r6Q8R2D4 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Vmn1r6Q8R2D4 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC24.93■■□□□ 1.58
Vmn1r6Q8R2D4 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC24.86■■□□□ 1.57
Vmn1r6Q8R2D4 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC24.85■■□□□ 1.57
Vmn1r6Q8R2D4 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Vmn1r6Q8R2D4 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC24.8■■□□□ 1.56
Vmn1r6Q8R2D4 Gm2415-204ENSMUST00000190235 2004 ntBASIC24.79■■□□□ 1.56
Vmn1r6Q8R2D4 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC24.79■■□□□ 1.56
Vmn1r6Q8R2D4 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Vmn1r6Q8R2D4 Zfp131-207ENSMUST00000224946 1783 ntBASIC24.77■■□□□ 1.56
Vmn1r6Q8R2D4 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC24.77■■□□□ 1.56
Vmn1r6Q8R2D4 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Vmn1r6Q8R2D4 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Vmn1r6Q8R2D4 AC153504.1-201ENSMUST00000218379 2290 ntBASIC24.74■■□□□ 1.55
Vmn1r6Q8R2D4 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Vmn1r6Q8R2D4 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Vmn1r6Q8R2D4 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC24.71■■□□□ 1.55
Vmn1r6Q8R2D4 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Vmn1r6Q8R2D4 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
Vmn1r6Q8R2D4 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC24.66■■□□□ 1.54
Vmn1r6Q8R2D4 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Vmn1r6Q8R2D4 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Vmn1r6Q8R2D4 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Vmn1r6Q8R2D4 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Vmn1r6Q8R2D4 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Vmn1r6Q8R2D4 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC24.61■■□□□ 1.53
Vmn1r6Q8R2D4 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Vmn1r6Q8R2D4 Gm6658-202ENSMUST00000209493 1885 ntBASIC24.58■■□□□ 1.52
Vmn1r6Q8R2D4 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Vmn1r6Q8R2D4 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Vmn1r6Q8R2D4 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Vmn1r6Q8R2D4 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
Vmn1r6Q8R2D4 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Vmn1r6Q8R2D4 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Vmn1r6Q8R2D4 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Vmn1r6Q8R2D4 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Vmn1r6Q8R2D4 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC24.44■■□□□ 1.5
Vmn1r6Q8R2D4 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC24.44■■□□□ 1.5
Vmn1r6Q8R2D4 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC24.43■■□□□ 1.5
Vmn1r6Q8R2D4 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC24.43■■□□□ 1.5
Vmn1r6Q8R2D4 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Vmn1r6Q8R2D4 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Vmn1r6Q8R2D4 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC24.38■■□□□ 1.49
Vmn1r6Q8R2D4 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
Vmn1r6Q8R2D4 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Vmn1r6Q8R2D4 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC24.36■■□□□ 1.49
Vmn1r6Q8R2D4 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
Vmn1r6Q8R2D4 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
Vmn1r6Q8R2D4 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Vmn1r6Q8R2D4 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC24.31■■□□□ 1.48
Vmn1r6Q8R2D4 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC24.31■■□□□ 1.48
Vmn1r6Q8R2D4 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Vmn1r6Q8R2D4 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Vmn1r6Q8R2D4 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC24.28■■□□□ 1.48
Vmn1r6Q8R2D4 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Vmn1r6Q8R2D4 Rab21-202ENSMUST00000218831 843 ntBASIC24.26■■□□□ 1.47
Vmn1r6Q8R2D4 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
Vmn1r6Q8R2D4 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Vmn1r6Q8R2D4 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC24.23■■□□□ 1.47
Vmn1r6Q8R2D4 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC24.21■■□□□ 1.47
Vmn1r6Q8R2D4 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Vmn1r6Q8R2D4 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC24.2■■□□□ 1.47
Vmn1r6Q8R2D4 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC24.18■■□□□ 1.46
Vmn1r6Q8R2D4 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Vmn1r6Q8R2D4 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC24.18■■□□□ 1.46
Vmn1r6Q8R2D4 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Vmn1r6Q8R2D4 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC24.15■■□□□ 1.46
Vmn1r6Q8R2D4 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC24.14■■□□□ 1.46
Vmn1r6Q8R2D4 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
Vmn1r6Q8R2D4 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Vmn1r6Q8R2D4 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC24.14■■□□□ 1.45
Vmn1r6Q8R2D4 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Vmn1r6Q8R2D4 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Retrieved 100 of 76,532 protein–RNA pairs in 133.7 ms