Protein–RNA interactions for Protein: Q8R297

Vmn1r235, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 328 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r235Q8R297 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC22.9■■□□□ 1.26
Vmn1r235Q8R297 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC22.89■■□□□ 1.26
Vmn1r235Q8R297 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Vmn1r235Q8R297 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC22.77■■□□□ 1.24
Vmn1r235Q8R297 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC22.76■■□□□ 1.23
Vmn1r235Q8R297 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
Vmn1r235Q8R297 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Vmn1r235Q8R297 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
Vmn1r235Q8R297 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Vmn1r235Q8R297 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Vmn1r235Q8R297 Gm27325-201ENSMUST00000175467 74 ntBASIC22.64■■□□□ 1.21
Vmn1r235Q8R297 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Vmn1r235Q8R297 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC22.62■■□□□ 1.21
Vmn1r235Q8R297 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Vmn1r235Q8R297 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Vmn1r235Q8R297 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
Vmn1r235Q8R297 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Vmn1r235Q8R297 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC22.56■■□□□ 1.2
Vmn1r235Q8R297 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Vmn1r235Q8R297 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
Vmn1r235Q8R297 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Vmn1r235Q8R297 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Vmn1r235Q8R297 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC22.43■■□□□ 1.18
Vmn1r235Q8R297 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Vmn1r235Q8R297 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Vmn1r235Q8R297 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Vmn1r235Q8R297 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
Vmn1r235Q8R297 Gm2415-204ENSMUST00000190235 2004 ntBASIC22.35■■□□□ 1.17
Vmn1r235Q8R297 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Vmn1r235Q8R297 AC153504.1-201ENSMUST00000218379 2290 ntBASIC22.33■■□□□ 1.17
Vmn1r235Q8R297 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC22.31■■□□□ 1.16
Vmn1r235Q8R297 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Vmn1r235Q8R297 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Vmn1r235Q8R297 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Vmn1r235Q8R297 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Vmn1r235Q8R297 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Vmn1r235Q8R297 Zfp131-207ENSMUST00000224946 1783 ntBASIC22.25■■□□□ 1.15
Vmn1r235Q8R297 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Vmn1r235Q8R297 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Vmn1r235Q8R297 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
Vmn1r235Q8R297 Gm25238-201ENSMUST00000174914 89 ntBASIC22.21■■□□□ 1.15
Vmn1r235Q8R297 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Vmn1r235Q8R297 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Vmn1r235Q8R297 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Vmn1r235Q8R297 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Vmn1r235Q8R297 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Vmn1r235Q8R297 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC22.18■■□□□ 1.14
Vmn1r235Q8R297 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Vmn1r235Q8R297 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Vmn1r235Q8R297 Gm6658-202ENSMUST00000209493 1885 ntBASIC22.15■■□□□ 1.14
Vmn1r235Q8R297 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Vmn1r235Q8R297 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Vmn1r235Q8R297 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Vmn1r235Q8R297 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC22.13■■□□□ 1.13
Vmn1r235Q8R297 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC22.1■■□□□ 1.13
Vmn1r235Q8R297 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Vmn1r235Q8R297 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Vmn1r235Q8R297 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Vmn1r235Q8R297 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Vmn1r235Q8R297 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Vmn1r235Q8R297 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC22.06■■□□□ 1.12
Vmn1r235Q8R297 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC22■■□□□ 1.11
Vmn1r235Q8R297 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Vmn1r235Q8R297 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Vmn1r235Q8R297 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.11
Vmn1r235Q8R297 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC21.95■■□□□ 1.1
Vmn1r235Q8R297 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Vmn1r235Q8R297 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC21.94■■□□□ 1.1
Vmn1r235Q8R297 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC21.94■■□□□ 1.1
Vmn1r235Q8R297 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC21.94■■□□□ 1.1
Vmn1r235Q8R297 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Vmn1r235Q8R297 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Vmn1r235Q8R297 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Vmn1r235Q8R297 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Vmn1r235Q8R297 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC21.9■■□□□ 1.1
Vmn1r235Q8R297 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Vmn1r235Q8R297 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Vmn1r235Q8R297 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Vmn1r235Q8R297 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Vmn1r235Q8R297 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Vmn1r235Q8R297 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Vmn1r235Q8R297 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Vmn1r235Q8R297 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Vmn1r235Q8R297 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Vmn1r235Q8R297 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
Vmn1r235Q8R297 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC21.79■■□□□ 1.08
Vmn1r235Q8R297 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
Vmn1r235Q8R297 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Vmn1r235Q8R297 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
Vmn1r235Q8R297 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC21.76■■□□□ 1.07
Vmn1r235Q8R297 Gm6206-201ENSMUST00000133472 2199 ntBASIC21.75■■□□□ 1.07
Vmn1r235Q8R297 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Vmn1r235Q8R297 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Vmn1r235Q8R297 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Vmn1r235Q8R297 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Vmn1r235Q8R297 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Vmn1r235Q8R297 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Vmn1r235Q8R297 Zxda-201ENSMUST00000117281 2621 ntBASIC21.7■■□□□ 1.06
Vmn1r235Q8R297 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Vmn1r235Q8R297 Gm9905-201ENSMUST00000065740 1845 ntBASIC21.68■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 11.3 ms