Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Nudcd3Q8R1N4 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Nudcd3Q8R1N4 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC27.24■■□□□ 1.95
Nudcd3Q8R1N4 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC27.2■■□□□ 1.94
Nudcd3Q8R1N4 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
Nudcd3Q8R1N4 Gm27325-201ENSMUST00000175467 74 ntBASIC27.16■■□□□ 1.94
Nudcd3Q8R1N4 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Nudcd3Q8R1N4 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC27.09■■□□□ 1.93
Nudcd3Q8R1N4 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Nudcd3Q8R1N4 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC27.07■■□□□ 1.92
Nudcd3Q8R1N4 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Nudcd3Q8R1N4 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC27.05■■□□□ 1.92
Nudcd3Q8R1N4 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC27.01■■□□□ 1.91
Nudcd3Q8R1N4 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC27.01■■□□□ 1.91
Nudcd3Q8R1N4 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC26.95■■□□□ 1.91
Nudcd3Q8R1N4 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
Nudcd3Q8R1N4 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Nudcd3Q8R1N4 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Nudcd3Q8R1N4 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
Nudcd3Q8R1N4 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC26.9■■□□□ 1.9
Nudcd3Q8R1N4 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC26.88■■□□□ 1.89
Nudcd3Q8R1N4 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Nudcd3Q8R1N4 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC26.86■■□□□ 1.89
Nudcd3Q8R1N4 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Nudcd3Q8R1N4 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC26.78■■□□□ 1.88
Nudcd3Q8R1N4 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Nudcd3Q8R1N4 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Nudcd3Q8R1N4 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Nudcd3Q8R1N4 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC26.71■■□□□ 1.87
Nudcd3Q8R1N4 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC26.7■■□□□ 1.86
Nudcd3Q8R1N4 Gm25238-201ENSMUST00000174914 89 ntBASIC26.66■■□□□ 1.86
Nudcd3Q8R1N4 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC26.66■■□□□ 1.86
Nudcd3Q8R1N4 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Nudcd3Q8R1N4 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC26.64■■□□□ 1.86
Nudcd3Q8R1N4 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC26.63■■□□□ 1.85
Nudcd3Q8R1N4 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Nudcd3Q8R1N4 Gm2415-204ENSMUST00000190235 2004 ntBASIC26.61■■□□□ 1.85
Nudcd3Q8R1N4 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Nudcd3Q8R1N4 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Nudcd3Q8R1N4 Zfp131-207ENSMUST00000224946 1783 ntBASIC26.58■■□□□ 1.85
Nudcd3Q8R1N4 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Nudcd3Q8R1N4 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC26.53■■□□□ 1.84
Nudcd3Q8R1N4 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC26.52■■□□□ 1.84
Nudcd3Q8R1N4 AC153504.1-201ENSMUST00000218379 2290 ntBASIC26.51■■□□□ 1.83
Nudcd3Q8R1N4 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC26.5■■□□□ 1.83
Nudcd3Q8R1N4 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Nudcd3Q8R1N4 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Nudcd3Q8R1N4 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
Nudcd3Q8R1N4 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
Nudcd3Q8R1N4 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Nudcd3Q8R1N4 Gm6658-202ENSMUST00000209493 1885 ntBASIC26.4■■□□□ 1.82
Nudcd3Q8R1N4 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC26.4■■□□□ 1.82
Nudcd3Q8R1N4 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC26.38■■□□□ 1.81
Nudcd3Q8R1N4 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC26.38■■□□□ 1.81
Nudcd3Q8R1N4 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Nudcd3Q8R1N4 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Nudcd3Q8R1N4 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Nudcd3Q8R1N4 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Nudcd3Q8R1N4 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Nudcd3Q8R1N4 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Nudcd3Q8R1N4 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC26.27■■□□□ 1.8
Nudcd3Q8R1N4 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Nudcd3Q8R1N4 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
Nudcd3Q8R1N4 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC26.24■■□□□ 1.79
Nudcd3Q8R1N4 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Nudcd3Q8R1N4 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC26.22■■□□□ 1.79
Nudcd3Q8R1N4 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Nudcd3Q8R1N4 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Nudcd3Q8R1N4 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC26.19■■□□□ 1.78
Nudcd3Q8R1N4 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
Nudcd3Q8R1N4 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC26.18■■□□□ 1.78
Nudcd3Q8R1N4 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Nudcd3Q8R1N4 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
Nudcd3Q8R1N4 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC26.09■■□□□ 1.77
Nudcd3Q8R1N4 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Nudcd3Q8R1N4 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Nudcd3Q8R1N4 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.76
Nudcd3Q8R1N4 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC26.06■■□□□ 1.76
Nudcd3Q8R1N4 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
Nudcd3Q8R1N4 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Nudcd3Q8R1N4 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Nudcd3Q8R1N4 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
Nudcd3Q8R1N4 Rab21-202ENSMUST00000218831 843 ntBASIC26.03■■□□□ 1.76
Nudcd3Q8R1N4 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC26.02■■□□□ 1.76
Nudcd3Q8R1N4 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC26.02■■□□□ 1.76
Nudcd3Q8R1N4 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Nudcd3Q8R1N4 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Nudcd3Q8R1N4 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Nudcd3Q8R1N4 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Nudcd3Q8R1N4 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC25.96■■□□□ 1.75
Nudcd3Q8R1N4 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC25.96■■□□□ 1.75
Nudcd3Q8R1N4 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
Nudcd3Q8R1N4 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
Nudcd3Q8R1N4 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC25.93■■□□□ 1.74
Nudcd3Q8R1N4 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC25.93■■□□□ 1.74
Nudcd3Q8R1N4 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Nudcd3Q8R1N4 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC25.92■■□□□ 1.74
Nudcd3Q8R1N4 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Nudcd3Q8R1N4 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
Nudcd3Q8R1N4 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC25.87■■□□□ 1.73
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms