Protein–RNA interactions for Protein: Q8R1C0

Kcnc4, Potassium voltage-gated channel subfamily C member 4, mousemouse

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcnc4Q8R1C0 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC32.51■■■□□ 2.79
Kcnc4Q8R1C0 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
Kcnc4Q8R1C0 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
Kcnc4Q8R1C0 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC32.48■■■□□ 2.79
Kcnc4Q8R1C0 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC32.42■■■□□ 2.78
Kcnc4Q8R1C0 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC32.4■■■□□ 2.78
Kcnc4Q8R1C0 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC32.39■■■□□ 2.78
Kcnc4Q8R1C0 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC32.34■■■□□ 2.77
Kcnc4Q8R1C0 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC32.33■■■□□ 2.77
Kcnc4Q8R1C0 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC32.31■■■□□ 2.76
Kcnc4Q8R1C0 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
Kcnc4Q8R1C0 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC32.23■■■□□ 2.75
Kcnc4Q8R1C0 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC32.22■■■□□ 2.75
Kcnc4Q8R1C0 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC32.19■■■□□ 2.74
Kcnc4Q8R1C0 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC32.17■■■□□ 2.74
Kcnc4Q8R1C0 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
Kcnc4Q8R1C0 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
Kcnc4Q8R1C0 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC32.06■■■□□ 2.72
Kcnc4Q8R1C0 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC32.06■■■□□ 2.72
Kcnc4Q8R1C0 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
Kcnc4Q8R1C0 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
Kcnc4Q8R1C0 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
Kcnc4Q8R1C0 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC31.96■■■□□ 2.71
Kcnc4Q8R1C0 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
Kcnc4Q8R1C0 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
Kcnc4Q8R1C0 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC31.94■■■□□ 2.7
Kcnc4Q8R1C0 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
Kcnc4Q8R1C0 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
Kcnc4Q8R1C0 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC31.86■■■□□ 2.69
Kcnc4Q8R1C0 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC31.84■■■□□ 2.69
Kcnc4Q8R1C0 Gm5987-201ENSMUST00000196433 1151 ntBASIC31.84■■■□□ 2.69
Kcnc4Q8R1C0 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC31.82■■■□□ 2.68
Kcnc4Q8R1C0 Tdp2-203ENSMUST00000223804 1136 ntBASIC31.78■■■□□ 2.68
Kcnc4Q8R1C0 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
Kcnc4Q8R1C0 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
Kcnc4Q8R1C0 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC31.76■■■□□ 2.67
Kcnc4Q8R1C0 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC31.74■■■□□ 2.67
Kcnc4Q8R1C0 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
Kcnc4Q8R1C0 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC31.69■■■□□ 2.66
Kcnc4Q8R1C0 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
Kcnc4Q8R1C0 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
Kcnc4Q8R1C0 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
Kcnc4Q8R1C0 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC31.66■■■□□ 2.66
Kcnc4Q8R1C0 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.65
Kcnc4Q8R1C0 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC31.61■■■□□ 2.65
Kcnc4Q8R1C0 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
Kcnc4Q8R1C0 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC31.58■■■□□ 2.65
Kcnc4Q8R1C0 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
Kcnc4Q8R1C0 Gm16148-201ENSMUST00000119653 893 ntBASIC31.51■■■□□ 2.63
Kcnc4Q8R1C0 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
Kcnc4Q8R1C0 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC31.48■■■□□ 2.63
Kcnc4Q8R1C0 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC31.46■■■□□ 2.63
Kcnc4Q8R1C0 AC166822.3-201ENSMUST00000227394 661 ntBASIC31.46■■■□□ 2.63
Kcnc4Q8R1C0 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
Kcnc4Q8R1C0 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC31.38■■■□□ 2.61
Kcnc4Q8R1C0 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
Kcnc4Q8R1C0 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Kcnc4Q8R1C0 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC31.37■■■□□ 2.61
Kcnc4Q8R1C0 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC31.35■■■□□ 2.61
Kcnc4Q8R1C0 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Kcnc4Q8R1C0 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Kcnc4Q8R1C0 Gm42596-201ENSMUST00000196305 1958 ntBASIC31.33■■■□□ 2.61
Kcnc4Q8R1C0 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC31.32■■■□□ 2.6
Kcnc4Q8R1C0 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC31.32■■■□□ 2.6
Kcnc4Q8R1C0 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Kcnc4Q8R1C0 Gm45855-201ENSMUST00000212546 880 ntBASIC31.29■■■□□ 2.6
Kcnc4Q8R1C0 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC31.29■■■□□ 2.6
Kcnc4Q8R1C0 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC31.28■■■□□ 2.6
Kcnc4Q8R1C0 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC31.27■■■□□ 2.6
Kcnc4Q8R1C0 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
Kcnc4Q8R1C0 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC31.26■■■□□ 2.59
Kcnc4Q8R1C0 CT025624.2-201ENSMUST00000223609 1909 ntBASIC31.24■■■□□ 2.59
Kcnc4Q8R1C0 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Kcnc4Q8R1C0 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC31.18■■■□□ 2.58
Kcnc4Q8R1C0 Gm10524-201ENSMUST00000181931 1893 ntBASIC31.18■■■□□ 2.58
Kcnc4Q8R1C0 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC31.16■■■□□ 2.58
Kcnc4Q8R1C0 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
Kcnc4Q8R1C0 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
Kcnc4Q8R1C0 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC31.13■■■□□ 2.57
Kcnc4Q8R1C0 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Kcnc4Q8R1C0 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
Kcnc4Q8R1C0 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Kcnc4Q8R1C0 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC31.06■■■□□ 2.56
Kcnc4Q8R1C0 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC31.05■■■□□ 2.56
Kcnc4Q8R1C0 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC31.04■■■□□ 2.56
Kcnc4Q8R1C0 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
Kcnc4Q8R1C0 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC31.03■■■□□ 2.56
Kcnc4Q8R1C0 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Kcnc4Q8R1C0 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.56
Kcnc4Q8R1C0 AL845457.1-201ENSMUST00000197244 68 ntBASIC31■■■□□ 2.55
Kcnc4Q8R1C0 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
Kcnc4Q8R1C0 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC30.98■■■□□ 2.55
Kcnc4Q8R1C0 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
Kcnc4Q8R1C0 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC30.95■■■□□ 2.55
Kcnc4Q8R1C0 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
Kcnc4Q8R1C0 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
Kcnc4Q8R1C0 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Kcnc4Q8R1C0 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
Kcnc4Q8R1C0 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
Kcnc4Q8R1C0 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC30.89■■■□□ 2.54
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms