Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC32,99■■■□□ 2,87
Atf7Q8R0S1 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC32,96■■■□□ 2,87
Atf7Q8R0S1 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC32,94■■■□□ 2,86
Atf7Q8R0S1 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC32,89■■■□□ 2,86
Atf7Q8R0S1 Rab21-202ENSMUST00000218831 843 ntBASIC32,89■■■□□ 2,86
Atf7Q8R0S1 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC32,8■■■□□ 2,84
Atf7Q8R0S1 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC32,79■■■□□ 2,84
Atf7Q8R0S1 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC32,78■■■□□ 2,84
Atf7Q8R0S1 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC32,76■■■□□ 2,84
Atf7Q8R0S1 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC32,73■■■□□ 2,83
Atf7Q8R0S1 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC32,7■■■□□ 2,83
Atf7Q8R0S1 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC32,7■■■□□ 2,82
Atf7Q8R0S1 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC32,69■■■□□ 2,82
Atf7Q8R0S1 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC32,68■■■□□ 2,82
Atf7Q8R0S1 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC32,63■■■□□ 2,81
Atf7Q8R0S1 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC32,6■■■□□ 2,81
Atf7Q8R0S1 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC32,55■■■□□ 2,8
Atf7Q8R0S1 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC32,52■■■□□ 2,8
Atf7Q8R0S1 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC32,5■■■□□ 2,79
Atf7Q8R0S1 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC32,46■■■□□ 2,79
Atf7Q8R0S1 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC32,45■■■□□ 2,79
Atf7Q8R0S1 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC32,45■■■□□ 2,79
Atf7Q8R0S1 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC32,44■■■□□ 2,78
Atf7Q8R0S1 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC32,43■■■□□ 2,78
Atf7Q8R0S1 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC32,41■■■□□ 2,78
Atf7Q8R0S1 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC32,39■■■□□ 2,78
Atf7Q8R0S1 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC32,37■■■□□ 2,77
Atf7Q8R0S1 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC32,34■■■□□ 2,77
Atf7Q8R0S1 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC32,34■■■□□ 2,77
Atf7Q8R0S1 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC32,32■■■□□ 2,77
Atf7Q8R0S1 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC32,32■■■□□ 2,76
Atf7Q8R0S1 Zfp131-207ENSMUST00000224946 1783 ntBASIC32,3■■■□□ 2,76
Atf7Q8R0S1 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC32,29■■■□□ 2,76
Atf7Q8R0S1 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC32,29■■■□□ 2,76
Atf7Q8R0S1 Gm25262-201ENSMUST00000174934 133 ntBASIC32,27■■■□□ 2,76
Atf7Q8R0S1 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC32,26■■■□□ 2,75
Atf7Q8R0S1 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC32,26■■■□□ 2,75
Atf7Q8R0S1 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC32,25■■■□□ 2,75
Atf7Q8R0S1 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC32,21■■■□□ 2,75
Atf7Q8R0S1 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC32,2■■■□□ 2,74
Atf7Q8R0S1 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC32,18■■■□□ 2,74
Atf7Q8R0S1 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC32,17■■■□□ 2,74
Atf7Q8R0S1 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC32,1■■■□□ 2,73
Atf7Q8R0S1 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC32,08■■■□□ 2,73
Atf7Q8R0S1 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC32,07■■■□□ 2,72
Atf7Q8R0S1 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC32,04■■■□□ 2,72
Atf7Q8R0S1 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC32,03■■■□□ 2,72
Atf7Q8R0S1 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC32,02■■■□□ 2,72
Atf7Q8R0S1 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC32,01■■■□□ 2,71
Atf7Q8R0S1 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC31,96■■■□□ 2,71
Atf7Q8R0S1 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC31,95■■■□□ 2,71
Atf7Q8R0S1 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC31,93■■■□□ 2,7
Atf7Q8R0S1 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC31,91■■■□□ 2,7
Atf7Q8R0S1 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC31,89■■■□□ 2,69
Atf7Q8R0S1 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC31,84■■■□□ 2,69
Atf7Q8R0S1 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC31,83■■■□□ 2,69
Atf7Q8R0S1 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC31,8■■■□□ 2,68
Atf7Q8R0S1 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC31,78■■■□□ 2,68
Atf7Q8R0S1 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC31,78■■■□□ 2,68
Atf7Q8R0S1 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC31,75■■■□□ 2,67
Atf7Q8R0S1 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC31,71■■■□□ 2,67
Atf7Q8R0S1 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC31,69■■■□□ 2,66
Atf7Q8R0S1 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC31,69■■■□□ 2,66
Atf7Q8R0S1 AL845457.1-201ENSMUST00000197244 68 ntBASIC31,69■■■□□ 2,66
Atf7Q8R0S1 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC31,67■■■□□ 2,66
Atf7Q8R0S1 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC31,63■■■□□ 2,65
Atf7Q8R0S1 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC31,63■■■□□ 2,65
Atf7Q8R0S1 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC31,62■■■□□ 2,65
Atf7Q8R0S1 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC31,62■■■□□ 2,65
Atf7Q8R0S1 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC31,58■■■□□ 2,65
Atf7Q8R0S1 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC31,57■■■□□ 2,64
Atf7Q8R0S1 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC31,55■■■□□ 2,64
Atf7Q8R0S1 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC31,52■■■□□ 2,64
Atf7Q8R0S1 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC31,51■■■□□ 2,63
Atf7Q8R0S1 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC31,51■■■□□ 2,63
Atf7Q8R0S1 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC31,49■■■□□ 2,63
Atf7Q8R0S1 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC31,49■■■□□ 2,63
Atf7Q8R0S1 Gm17082-201ENSMUST00000166043 1091 ntBASIC31,48■■■□□ 2,63
Atf7Q8R0S1 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC31,46■■■□□ 2,63
Atf7Q8R0S1 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC31,44■■■□□ 2,62
Atf7Q8R0S1 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC31,44■■■□□ 2,62
Atf7Q8R0S1 Gm2415-204ENSMUST00000190235 2004 ntBASIC31,44■■■□□ 2,62
Atf7Q8R0S1 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC31,44■■■□□ 2,62
Atf7Q8R0S1 Mipep-204ENSMUST00000225043 1548 ntBASIC31,43■■■□□ 2,62
Atf7Q8R0S1 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC31,42■■■□□ 2,62
Atf7Q8R0S1 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC31,42■■■□□ 2,62
Atf7Q8R0S1 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC31,41■■■□□ 2,62
Atf7Q8R0S1 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC31,38■■■□□ 2,61
Atf7Q8R0S1 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC31,37■■■□□ 2,61
Atf7Q8R0S1 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC31,35■■■□□ 2,61
Atf7Q8R0S1 Gm27322-201ENSMUST00000184007 104 ntBASIC31,34■■■□□ 2,61
Atf7Q8R0S1 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC31,33■■■□□ 2,61
Atf7Q8R0S1 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC31,32■■■□□ 2,6
Atf7Q8R0S1 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC31,31■■■□□ 2,6
Atf7Q8R0S1 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC31,28■■■□□ 2,6
Atf7Q8R0S1 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC31,27■■■□□ 2,6
Atf7Q8R0S1 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC31,23■■■□□ 2,59
Atf7Q8R0S1 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC31,21■■■□□ 2,59
Atf7Q8R0S1 Gm6658-202ENSMUST00000209493 1885 ntBASIC31,21■■■□□ 2,59
Atf7Q8R0S1 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC31,2■■■□□ 2,59
Retrieved 100 of 76,532 protein–RNA pairs in 11,6 ms