Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
Atf7Q8R0S1 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC32.96■■■□□ 2.87
Atf7Q8R0S1 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
Atf7Q8R0S1 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC32.89■■■□□ 2.86
Atf7Q8R0S1 Rab21-202ENSMUST00000218831 843 ntBASIC32.89■■■□□ 2.86
Atf7Q8R0S1 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
Atf7Q8R0S1 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
Atf7Q8R0S1 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC32.78■■■□□ 2.84
Atf7Q8R0S1 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.84
Atf7Q8R0S1 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
Atf7Q8R0S1 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC32.7■■■□□ 2.83
Atf7Q8R0S1 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.82
Atf7Q8R0S1 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC32.69■■■□□ 2.82
Atf7Q8R0S1 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC32.68■■■□□ 2.82
Atf7Q8R0S1 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC32.63■■■□□ 2.81
Atf7Q8R0S1 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC32.6■■■□□ 2.81
Atf7Q8R0S1 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC32.55■■■□□ 2.8
Atf7Q8R0S1 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
Atf7Q8R0S1 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
Atf7Q8R0S1 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC32.46■■■□□ 2.79
Atf7Q8R0S1 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC32.45■■■□□ 2.79
Atf7Q8R0S1 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
Atf7Q8R0S1 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC32.44■■■□□ 2.78
Atf7Q8R0S1 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC32.43■■■□□ 2.78
Atf7Q8R0S1 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC32.41■■■□□ 2.78
Atf7Q8R0S1 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC32.39■■■□□ 2.78
Atf7Q8R0S1 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC32.37■■■□□ 2.77
Atf7Q8R0S1 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
Atf7Q8R0S1 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC32.34■■■□□ 2.77
Atf7Q8R0S1 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC32.32■■■□□ 2.77
Atf7Q8R0S1 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
Atf7Q8R0S1 Zfp131-207ENSMUST00000224946 1783 ntBASIC32.3■■■□□ 2.76
Atf7Q8R0S1 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC32.29■■■□□ 2.76
Atf7Q8R0S1 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
Atf7Q8R0S1 Gm25262-201ENSMUST00000174934 133 ntBASIC32.27■■■□□ 2.76
Atf7Q8R0S1 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC32.26■■■□□ 2.75
Atf7Q8R0S1 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
Atf7Q8R0S1 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
Atf7Q8R0S1 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
Atf7Q8R0S1 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.74
Atf7Q8R0S1 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC32.18■■■□□ 2.74
Atf7Q8R0S1 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
Atf7Q8R0S1 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC32.1■■■□□ 2.73
Atf7Q8R0S1 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC32.08■■■□□ 2.73
Atf7Q8R0S1 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
Atf7Q8R0S1 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
Atf7Q8R0S1 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
Atf7Q8R0S1 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC32.02■■■□□ 2.72
Atf7Q8R0S1 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC32.01■■■□□ 2.71
Atf7Q8R0S1 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC31.96■■■□□ 2.71
Atf7Q8R0S1 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC31.95■■■□□ 2.71
Atf7Q8R0S1 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
Atf7Q8R0S1 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC31.91■■■□□ 2.7
Atf7Q8R0S1 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.69
Atf7Q8R0S1 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
Atf7Q8R0S1 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
Atf7Q8R0S1 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC31.8■■■□□ 2.68
Atf7Q8R0S1 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
Atf7Q8R0S1 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
Atf7Q8R0S1 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC31.75■■■□□ 2.67
Atf7Q8R0S1 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC31.71■■■□□ 2.67
Atf7Q8R0S1 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
Atf7Q8R0S1 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC31.69■■■□□ 2.66
Atf7Q8R0S1 AL845457.1-201ENSMUST00000197244 68 ntBASIC31.69■■■□□ 2.66
Atf7Q8R0S1 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC31.67■■■□□ 2.66
Atf7Q8R0S1 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC31.63■■■□□ 2.65
Atf7Q8R0S1 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
Atf7Q8R0S1 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
Atf7Q8R0S1 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC31.62■■■□□ 2.65
Atf7Q8R0S1 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
Atf7Q8R0S1 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC31.57■■■□□ 2.64
Atf7Q8R0S1 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
Atf7Q8R0S1 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
Atf7Q8R0S1 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC31.51■■■□□ 2.63
Atf7Q8R0S1 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC31.51■■■□□ 2.63
Atf7Q8R0S1 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
Atf7Q8R0S1 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
Atf7Q8R0S1 Gm17082-201ENSMUST00000166043 1091 ntBASIC31.48■■■□□ 2.63
Atf7Q8R0S1 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
Atf7Q8R0S1 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC31.44■■■□□ 2.62
Atf7Q8R0S1 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Atf7Q8R0S1 Gm2415-204ENSMUST00000190235 2004 ntBASIC31.44■■■□□ 2.62
Atf7Q8R0S1 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Atf7Q8R0S1 Mipep-204ENSMUST00000225043 1548 ntBASIC31.43■■■□□ 2.62
Atf7Q8R0S1 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
Atf7Q8R0S1 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
Atf7Q8R0S1 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC31.41■■■□□ 2.62
Atf7Q8R0S1 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC31.38■■■□□ 2.61
Atf7Q8R0S1 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC31.37■■■□□ 2.61
Atf7Q8R0S1 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC31.35■■■□□ 2.61
Atf7Q8R0S1 Gm27322-201ENSMUST00000184007 104 ntBASIC31.34■■■□□ 2.61
Atf7Q8R0S1 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC31.33■■■□□ 2.61
Atf7Q8R0S1 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC31.32■■■□□ 2.6
Atf7Q8R0S1 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Atf7Q8R0S1 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC31.28■■■□□ 2.6
Atf7Q8R0S1 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC31.27■■■□□ 2.6
Atf7Q8R0S1 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC31.23■■■□□ 2.59
Atf7Q8R0S1 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Atf7Q8R0S1 Gm6658-202ENSMUST00000209493 1885 ntBASIC31.21■■■□□ 2.59
Atf7Q8R0S1 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms