Protein–RNA interactions for Protein: Q8K5C8

Rdh9, Cis-retinol/androgen dehydrogenase type 3, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh9Q8K5C8 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC24.05■■□□□ 1.44
Rdh9Q8K5C8 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC24.05■■□□□ 1.44
Rdh9Q8K5C8 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Rdh9Q8K5C8 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Rdh9Q8K5C8 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC24.02■■□□□ 1.44
Rdh9Q8K5C8 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC24■■□□□ 1.43
Rdh9Q8K5C8 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Rdh9Q8K5C8 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Rdh9Q8K5C8 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC23.87■■□□□ 1.41
Rdh9Q8K5C8 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
Rdh9Q8K5C8 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Rdh9Q8K5C8 Rab21-202ENSMUST00000218831 843 ntBASIC23.8■■□□□ 1.4
Rdh9Q8K5C8 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Rdh9Q8K5C8 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Rdh9Q8K5C8 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Rdh9Q8K5C8 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC23.71■■□□□ 1.39
Rdh9Q8K5C8 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC23.69■■□□□ 1.38
Rdh9Q8K5C8 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Rdh9Q8K5C8 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC23.65■■□□□ 1.38
Rdh9Q8K5C8 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Rdh9Q8K5C8 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
Rdh9Q8K5C8 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Rdh9Q8K5C8 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
Rdh9Q8K5C8 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
Rdh9Q8K5C8 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Rdh9Q8K5C8 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC23.58■■□□□ 1.37
Rdh9Q8K5C8 Gm25262-201ENSMUST00000174934 133 ntBASIC23.58■■□□□ 1.37
Rdh9Q8K5C8 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Rdh9Q8K5C8 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Rdh9Q8K5C8 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC23.56■■□□□ 1.36
Rdh9Q8K5C8 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Rdh9Q8K5C8 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
Rdh9Q8K5C8 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC23.52■■□□□ 1.36
Rdh9Q8K5C8 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Rdh9Q8K5C8 Zfp131-207ENSMUST00000224946 1783 ntBASIC23.52■■□□□ 1.36
Rdh9Q8K5C8 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC23.51■■□□□ 1.35
Rdh9Q8K5C8 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Rdh9Q8K5C8 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC23.5■■□□□ 1.35
Rdh9Q8K5C8 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Rdh9Q8K5C8 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
Rdh9Q8K5C8 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC23.47■■□□□ 1.35
Rdh9Q8K5C8 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC23.45■■□□□ 1.34
Rdh9Q8K5C8 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Rdh9Q8K5C8 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Rdh9Q8K5C8 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Rdh9Q8K5C8 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
Rdh9Q8K5C8 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC23.39■■□□□ 1.33
Rdh9Q8K5C8 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Rdh9Q8K5C8 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Rdh9Q8K5C8 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
Rdh9Q8K5C8 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC23.32■■□□□ 1.32
Rdh9Q8K5C8 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Rdh9Q8K5C8 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Rdh9Q8K5C8 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC23.3■■□□□ 1.32
Rdh9Q8K5C8 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Rdh9Q8K5C8 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Rdh9Q8K5C8 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Rdh9Q8K5C8 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Rdh9Q8K5C8 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
Rdh9Q8K5C8 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Rdh9Q8K5C8 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Rdh9Q8K5C8 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC23.1■■□□□ 1.29
Rdh9Q8K5C8 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
Rdh9Q8K5C8 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Rdh9Q8K5C8 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
Rdh9Q8K5C8 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC23.08■■□□□ 1.29
Rdh9Q8K5C8 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
Rdh9Q8K5C8 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Rdh9Q8K5C8 AL845457.1-201ENSMUST00000197244 68 ntBASIC23.04■■□□□ 1.28
Rdh9Q8K5C8 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
Rdh9Q8K5C8 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
Rdh9Q8K5C8 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC23.02■■□□□ 1.28
Rdh9Q8K5C8 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Rdh9Q8K5C8 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
Rdh9Q8K5C8 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC23■■□□□ 1.27
Rdh9Q8K5C8 Gm2415-204ENSMUST00000190235 2004 ntBASIC23■■□□□ 1.27
Rdh9Q8K5C8 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Rdh9Q8K5C8 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
Rdh9Q8K5C8 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Rdh9Q8K5C8 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Rdh9Q8K5C8 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC22.92■■□□□ 1.26
Rdh9Q8K5C8 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Rdh9Q8K5C8 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC22.91■■□□□ 1.26
Rdh9Q8K5C8 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
Rdh9Q8K5C8 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Rdh9Q8K5C8 Mipep-204ENSMUST00000225043 1548 ntBASIC22.87■■□□□ 1.25
Rdh9Q8K5C8 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Rdh9Q8K5C8 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Rdh9Q8K5C8 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Rdh9Q8K5C8 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC22.85■■□□□ 1.25
Rdh9Q8K5C8 Gm26115-201ENSMUST00000175605 87 ntBASIC22.85■■□□□ 1.25
Rdh9Q8K5C8 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Rdh9Q8K5C8 Gm6658-202ENSMUST00000209493 1885 ntBASIC22.84■■□□□ 1.25
Rdh9Q8K5C8 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Rdh9Q8K5C8 Gm17082-201ENSMUST00000166043 1091 ntBASIC22.81■■□□□ 1.24
Rdh9Q8K5C8 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Rdh9Q8K5C8 Gm8109-201ENSMUST00000194076 746 ntBASIC22.8■■□□□ 1.24
Rdh9Q8K5C8 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Rdh9Q8K5C8 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Rdh9Q8K5C8 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Retrieved 100 of 76,532 protein–RNA pairs in 8 ms