Protein–RNA interactions for Protein: Q8K441

Abca6, ATP-binding cassette sub-family A member 6, mousemouse

Predictions only

Length 1,624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca6Q8K441 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC41,9■■■■■ 4,3
Abca6Q8K441 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC41,9■■■■■ 4,3
Abca6Q8K441 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC41,86■■■■■ 4,29
Abca6Q8K441 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC41,84■■■■■ 4,29
Abca6Q8K441 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC41,81■■■■■ 4,28
Abca6Q8K441 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC41,81■■■■■ 4,28
Abca6Q8K441 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC41,77■■■■■ 4,28
Abca6Q8K441 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC41,64■■■■■ 4,26
Abca6Q8K441 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC41,64■■■■■ 4,26
Abca6Q8K441 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC41,62■■■■■ 4,25
Abca6Q8K441 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC41,58■■■■■ 4,25
Abca6Q8K441 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC41,58■■■■■ 4,25
Abca6Q8K441 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC41,45■■■■■ 4,23
Abca6Q8K441 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC41,44■■■■■ 4,22
Abca6Q8K441 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC41,43■■■■■ 4,22
Abca6Q8K441 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC41,39■■■■■ 4,22
Abca6Q8K441 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC41,37■■■■■ 4,21
Abca6Q8K441 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC41,36■■■■■ 4,21
Abca6Q8K441 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC41,33■■■■■ 4,21
Abca6Q8K441 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC41,29■■■■■ 4,2
Abca6Q8K441 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC41,26■■■■■ 4,2
Abca6Q8K441 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC41,26■■■■■ 4,2
Abca6Q8K441 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC41,22■■■■■ 4,19
Abca6Q8K441 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC41,22■■■■■ 4,19
Abca6Q8K441 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC41,18■■■■■ 4,18
Abca6Q8K441 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC41,15■■■■■ 4,18
Abca6Q8K441 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC41,13■■■■■ 4,18
Abca6Q8K441 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC41,12■■■■■ 4,17
Abca6Q8K441 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC41,1■■■■■ 4,17
Abca6Q8K441 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC41,07■■■■■ 4,16
Abca6Q8K441 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC41,06■■■■■ 4,16
Abca6Q8K441 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC41,06■■■■■ 4,16
Abca6Q8K441 Gm42596-201ENSMUST00000196305 1958 ntBASIC41,03■■■■■ 4,16
Abca6Q8K441 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC40,99■■■■■ 4,15
Abca6Q8K441 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC40,97■■■■■ 4,15
Abca6Q8K441 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC40,95■■■■■ 4,15
Abca6Q8K441 Gm10524-201ENSMUST00000181931 1893 ntBASIC40,91■■■■■ 4,14
Abca6Q8K441 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC40,9■■■■■ 4,14
Abca6Q8K441 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC40,87■■■■■ 4,13
Abca6Q8K441 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC40,87■■■■■ 4,13
Abca6Q8K441 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC40,86■■■■■ 4,13
Abca6Q8K441 AC166822.3-201ENSMUST00000227394 661 ntBASIC40,82■■■■■ 4,12
Abca6Q8K441 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC40,78■■■■■ 4,12
Abca6Q8K441 CT025624.2-201ENSMUST00000223609 1909 ntBASIC40,78■■■■■ 4,12
Abca6Q8K441 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC40,77■■■■■ 4,12
Abca6Q8K441 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC40,72■■■■■ 4,11
Abca6Q8K441 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC40,71■■■■■ 4,11
Abca6Q8K441 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC40,66■■■■■ 4,1
Abca6Q8K441 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC40,66■■■■■ 4,1
Abca6Q8K441 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC40,64■■■■■ 4,1
Abca6Q8K441 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC40,64■■■■■ 4,1
Abca6Q8K441 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC40,49■■■■■ 4,07
Abca6Q8K441 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC40,49■■■■■ 4,07
Abca6Q8K441 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC40,45■■■■■ 4,07
Abca6Q8K441 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC40,43■■■■■ 4,06
Abca6Q8K441 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC40,4■■■■■ 4,06
Abca6Q8K441 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC40,39■■■■■ 4,06
Abca6Q8K441 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC40,37■■■■■ 4,05
Abca6Q8K441 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC40,36■■■■■ 4,05
Abca6Q8K441 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC40,36■■■■■ 4,05
Abca6Q8K441 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC40,35■■■■■ 4,05
Abca6Q8K441 AL845457.1-201ENSMUST00000197244 68 ntBASIC40,34■■■■■ 4,05
Abca6Q8K441 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC40,33■■■■■ 4,05
Abca6Q8K441 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC40,28■■■■■ 4,04
Abca6Q8K441 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC40,28■■■■■ 4,04
Abca6Q8K441 Gm16148-201ENSMUST00000119653 893 ntBASIC40,28■■■■■ 4,04
Abca6Q8K441 Tdp2-203ENSMUST00000223804 1136 ntBASIC40,25■■■■■ 4,03
Abca6Q8K441 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC40,24■■■■■ 4,03
Abca6Q8K441 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC40,21■■■■■ 4,03
Abca6Q8K441 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC40,2■■■■■ 4,03
Abca6Q8K441 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC40,19■■■■■ 4,02
Abca6Q8K441 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC40,16■■■■■ 4,02
Abca6Q8K441 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC40,16■■■■■ 4,02
Abca6Q8K441 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC40,14■■■■■ 4,02
Abca6Q8K441 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC40,14■■■■■ 4,02
Abca6Q8K441 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC40,11■■■■■ 4,01
Abca6Q8K441 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC40,09■■■■■ 4,01
Abca6Q8K441 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC40,08■■■■■ 4,01
Abca6Q8K441 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC40,02■■■■■ 4
Abca6Q8K441 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC40,02■■■■■ 4
Abca6Q8K441 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC39,94■■■■□ 3,98
Abca6Q8K441 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC39,87■■■■□ 3,97
Abca6Q8K441 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC39,86■■■■□ 3,97
Abca6Q8K441 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC39,83■■■■□ 3,97
Abca6Q8K441 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC39,83■■■■□ 3,97
Abca6Q8K441 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC39,82■■■■□ 3,96
Abca6Q8K441 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC39,81■■■■□ 3,96
Abca6Q8K441 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC39,81■■■■□ 3,96
Abca6Q8K441 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC39,78■■■■□ 3,96
Abca6Q8K441 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC39,77■■■■□ 3,96
Abca6Q8K441 Gm45855-201ENSMUST00000212546 880 ntBASIC39,76■■■■□ 3,96
Abca6Q8K441 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC39,76■■■■□ 3,95
Abca6Q8K441 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC39,75■■■■□ 3,95
Abca6Q8K441 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC39,74■■■■□ 3,95
Abca6Q8K441 Peli2-204ENSMUST00000226513 1320 ntBASIC39,73■■■■□ 3,95
Abca6Q8K441 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC39,72■■■■□ 3,95
Abca6Q8K441 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC39,71■■■■□ 3,95
Abca6Q8K441 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC39,7■■■■□ 3,95
Abca6Q8K441 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC39,69■■■■□ 3,94
Abca6Q8K441 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC39,69■■■■□ 3,94
Retrieved 100 of 76,532 protein–RNA pairs in 10,1 ms