Protein–RNA interactions for Protein: Q8K2Y7

Mrpl47, 39S ribosomal protein L47, mitochondrial, mousemouse

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl47Q8K2Y7 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC27.15■■□□□ 1.94
Mrpl47Q8K2Y7 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC27.14■■□□□ 1.94
Mrpl47Q8K2Y7 Gm25238-201ENSMUST00000174914 89 ntBASIC27.13■■□□□ 1.93
Mrpl47Q8K2Y7 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC27.12■■□□□ 1.93
Mrpl47Q8K2Y7 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC27.09■■□□□ 1.93
Mrpl47Q8K2Y7 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC27.09■■□□□ 1.93
Mrpl47Q8K2Y7 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Mrpl47Q8K2Y7 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC27.08■■□□□ 1.93
Mrpl47Q8K2Y7 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Mrpl47Q8K2Y7 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC27.03■■□□□ 1.92
Mrpl47Q8K2Y7 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Mrpl47Q8K2Y7 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC27■■□□□ 1.91
Mrpl47Q8K2Y7 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC26.99■■□□□ 1.91
Mrpl47Q8K2Y7 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Mrpl47Q8K2Y7 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC26.96■■□□□ 1.91
Mrpl47Q8K2Y7 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
Mrpl47Q8K2Y7 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC26.89■■□□□ 1.9
Mrpl47Q8K2Y7 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Mrpl47Q8K2Y7 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
Mrpl47Q8K2Y7 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Mrpl47Q8K2Y7 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Mrpl47Q8K2Y7 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Mrpl47Q8K2Y7 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC26.74■■□□□ 1.87
Mrpl47Q8K2Y7 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Mrpl47Q8K2Y7 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC26.72■■□□□ 1.87
Mrpl47Q8K2Y7 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC26.7■■□□□ 1.87
Mrpl47Q8K2Y7 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Mrpl47Q8K2Y7 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC26.68■■□□□ 1.86
Mrpl47Q8K2Y7 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC26.68■■□□□ 1.86
Mrpl47Q8K2Y7 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC26.68■■□□□ 1.86
Mrpl47Q8K2Y7 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC26.66■■□□□ 1.86
Mrpl47Q8K2Y7 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC26.66■■□□□ 1.86
Mrpl47Q8K2Y7 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Mrpl47Q8K2Y7 Zfp131-207ENSMUST00000224946 1783 ntBASIC26.61■■□□□ 1.85
Mrpl47Q8K2Y7 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC26.55■■□□□ 1.84
Mrpl47Q8K2Y7 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Mrpl47Q8K2Y7 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
Mrpl47Q8K2Y7 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC26.53■■□□□ 1.84
Mrpl47Q8K2Y7 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC26.52■■□□□ 1.84
Mrpl47Q8K2Y7 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Mrpl47Q8K2Y7 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC26.47■■□□□ 1.83
Mrpl47Q8K2Y7 Rab21-202ENSMUST00000218831 843 ntBASIC26.46■■□□□ 1.83
Mrpl47Q8K2Y7 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Mrpl47Q8K2Y7 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Mrpl47Q8K2Y7 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC26.4■■□□□ 1.82
Mrpl47Q8K2Y7 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC26.39■■□□□ 1.82
Mrpl47Q8K2Y7 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
Mrpl47Q8K2Y7 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Mrpl47Q8K2Y7 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
Mrpl47Q8K2Y7 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC26.36■■□□□ 1.81
Mrpl47Q8K2Y7 Gm2415-204ENSMUST00000190235 2004 ntBASIC26.34■■□□□ 1.81
Mrpl47Q8K2Y7 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC26.33■■□□□ 1.81
Mrpl47Q8K2Y7 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC26.33■■□□□ 1.8
Mrpl47Q8K2Y7 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Mrpl47Q8K2Y7 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Mrpl47Q8K2Y7 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Mrpl47Q8K2Y7 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Mrpl47Q8K2Y7 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Mrpl47Q8K2Y7 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Mrpl47Q8K2Y7 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Mrpl47Q8K2Y7 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC26.26■■□□□ 1.79
Mrpl47Q8K2Y7 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC26.22■■□□□ 1.79
Mrpl47Q8K2Y7 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC26.22■■□□□ 1.79
Mrpl47Q8K2Y7 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC26.21■■□□□ 1.79
Mrpl47Q8K2Y7 Gm6658-202ENSMUST00000209493 1885 ntBASIC26.19■■□□□ 1.78
Mrpl47Q8K2Y7 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Mrpl47Q8K2Y7 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
Mrpl47Q8K2Y7 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
Mrpl47Q8K2Y7 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
Mrpl47Q8K2Y7 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
Mrpl47Q8K2Y7 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
Mrpl47Q8K2Y7 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Mrpl47Q8K2Y7 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC26.08■■□□□ 1.77
Mrpl47Q8K2Y7 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC26.07■■□□□ 1.76
Mrpl47Q8K2Y7 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC26.07■■□□□ 1.76
Mrpl47Q8K2Y7 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Mrpl47Q8K2Y7 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Mrpl47Q8K2Y7 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC26.04■■□□□ 1.76
Mrpl47Q8K2Y7 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Mrpl47Q8K2Y7 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Mrpl47Q8K2Y7 AC153504.1-201ENSMUST00000218379 2290 ntBASIC26.02■■□□□ 1.76
Mrpl47Q8K2Y7 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Mrpl47Q8K2Y7 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
Mrpl47Q8K2Y7 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC26■■□□□ 1.75
Mrpl47Q8K2Y7 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC25.99■■□□□ 1.75
Mrpl47Q8K2Y7 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC25.95■■□□□ 1.74
Mrpl47Q8K2Y7 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Mrpl47Q8K2Y7 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC25.92■■□□□ 1.74
Mrpl47Q8K2Y7 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Mrpl47Q8K2Y7 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC25.91■■□□□ 1.74
Mrpl47Q8K2Y7 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
Mrpl47Q8K2Y7 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
Mrpl47Q8K2Y7 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC25.88■■□□□ 1.73
Mrpl47Q8K2Y7 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC25.86■■□□□ 1.73
Mrpl47Q8K2Y7 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC25.86■■□□□ 1.73
Mrpl47Q8K2Y7 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC25.86■■□□□ 1.73
Mrpl47Q8K2Y7 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
Mrpl47Q8K2Y7 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
Mrpl47Q8K2Y7 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
Mrpl47Q8K2Y7 AL845457.1-201ENSMUST00000197244 68 ntBASIC25.83■■□□□ 1.73
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms