Protein–RNA interactions for Protein: Q8CIG0

Depdc1a, DEP domain-containing protein 1A, mousemouse

Predictions only

Length 804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1aQ8CIG0 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
Depdc1aQ8CIG0 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
Depdc1aQ8CIG0 Gm26115-201ENSMUST00000175605 87 ntBASIC32.04■■■□□ 2.72
Depdc1aQ8CIG0 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC32.04■■■□□ 2.72
Depdc1aQ8CIG0 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC32.03■■■□□ 2.72
Depdc1aQ8CIG0 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
Depdc1aQ8CIG0 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
Depdc1aQ8CIG0 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
Depdc1aQ8CIG0 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
Depdc1aQ8CIG0 Gm8109-201ENSMUST00000194076 746 ntBASIC31.93■■■□□ 2.7
Depdc1aQ8CIG0 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
Depdc1aQ8CIG0 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
Depdc1aQ8CIG0 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
Depdc1aQ8CIG0 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC31.86■■■□□ 2.69
Depdc1aQ8CIG0 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
Depdc1aQ8CIG0 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC31.81■■■□□ 2.68
Depdc1aQ8CIG0 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Depdc1aQ8CIG0 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
Depdc1aQ8CIG0 Gm17082-201ENSMUST00000166043 1091 ntBASIC31.74■■■□□ 2.67
Depdc1aQ8CIG0 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
Depdc1aQ8CIG0 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC31.69■■■□□ 2.66
Depdc1aQ8CIG0 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC31.68■■■□□ 2.66
Depdc1aQ8CIG0 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
Depdc1aQ8CIG0 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
Depdc1aQ8CIG0 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
Depdc1aQ8CIG0 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC31.51■■■□□ 2.63
Depdc1aQ8CIG0 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC31.5■■■□□ 2.63
Depdc1aQ8CIG0 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC31.5■■■□□ 2.63
Depdc1aQ8CIG0 Gm27322-201ENSMUST00000184007 104 ntBASIC31.47■■■□□ 2.63
Depdc1aQ8CIG0 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC31.47■■■□□ 2.63
Depdc1aQ8CIG0 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC31.42■■■□□ 2.62
Depdc1aQ8CIG0 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
Depdc1aQ8CIG0 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
Depdc1aQ8CIG0 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Depdc1aQ8CIG0 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC31.35■■■□□ 2.61
Depdc1aQ8CIG0 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC31.33■■■□□ 2.61
Depdc1aQ8CIG0 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC31.28■■■□□ 2.6
Depdc1aQ8CIG0 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Depdc1aQ8CIG0 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
Depdc1aQ8CIG0 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC31.23■■■□□ 2.59
Depdc1aQ8CIG0 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
Depdc1aQ8CIG0 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Depdc1aQ8CIG0 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC31.2■■■□□ 2.58
Depdc1aQ8CIG0 Zfp131-207ENSMUST00000224946 1783 ntBASIC31.2■■■□□ 2.58
Depdc1aQ8CIG0 AL845457.1-201ENSMUST00000197244 68 ntBASIC31.18■■■□□ 2.58
Depdc1aQ8CIG0 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
Depdc1aQ8CIG0 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
Depdc1aQ8CIG0 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
Depdc1aQ8CIG0 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Depdc1aQ8CIG0 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC31.05■■■□□ 2.56
Depdc1aQ8CIG0 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC31.04■■■□□ 2.56
Depdc1aQ8CIG0 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Depdc1aQ8CIG0 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC31.03■■■□□ 2.56
Depdc1aQ8CIG0 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
Depdc1aQ8CIG0 AC166822.3-201ENSMUST00000227394 661 ntBASIC31■■■□□ 2.55
Depdc1aQ8CIG0 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
Depdc1aQ8CIG0 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC30.99■■■□□ 2.55
Depdc1aQ8CIG0 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
Depdc1aQ8CIG0 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC30.99■■■□□ 2.55
Depdc1aQ8CIG0 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
Depdc1aQ8CIG0 Gm24804-201ENSMUST00000174982 85 ntBASIC30.97■■■□□ 2.55
Depdc1aQ8CIG0 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
Depdc1aQ8CIG0 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC30.89■■■□□ 2.54
Depdc1aQ8CIG0 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
Depdc1aQ8CIG0 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC30.8■■■□□ 2.52
Depdc1aQ8CIG0 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
Depdc1aQ8CIG0 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
Depdc1aQ8CIG0 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
Depdc1aQ8CIG0 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Depdc1aQ8CIG0 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC30.67■■■□□ 2.5
Depdc1aQ8CIG0 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
Depdc1aQ8CIG0 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Depdc1aQ8CIG0 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Depdc1aQ8CIG0 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Depdc1aQ8CIG0 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
Depdc1aQ8CIG0 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Depdc1aQ8CIG0 Mipep-204ENSMUST00000225043 1548 ntBASIC30.57■■■□□ 2.49
Depdc1aQ8CIG0 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
Depdc1aQ8CIG0 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Depdc1aQ8CIG0 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC30.53■■■□□ 2.48
Depdc1aQ8CIG0 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC30.51■■■□□ 2.47
Depdc1aQ8CIG0 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
Depdc1aQ8CIG0 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
Depdc1aQ8CIG0 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
Depdc1aQ8CIG0 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC30.48■■■□□ 2.47
Depdc1aQ8CIG0 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
Depdc1aQ8CIG0 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Depdc1aQ8CIG0 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC30.47■■■□□ 2.47
Depdc1aQ8CIG0 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
Depdc1aQ8CIG0 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
Depdc1aQ8CIG0 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
Depdc1aQ8CIG0 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC30.44■■■□□ 2.46
Depdc1aQ8CIG0 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
Depdc1aQ8CIG0 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
Depdc1aQ8CIG0 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
Depdc1aQ8CIG0 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
Depdc1aQ8CIG0 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC30.3■■■□□ 2.44
Depdc1aQ8CIG0 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Depdc1aQ8CIG0 Peli2-204ENSMUST00000226513 1320 ntBASIC30.28■■■□□ 2.44
Depdc1aQ8CIG0 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC30.28■■■□□ 2.44
Retrieved 100 of 76,532 protein–RNA pairs in 69.2 ms