Protein–RNA interactions for Protein: Q8CI19

Pdgfc, Platelet-derived growth factor C, mousemouse

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfcQ8CI19 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
PdgfcQ8CI19 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC31.6■■■□□ 2.65
PdgfcQ8CI19 Gm42596-201ENSMUST00000196305 1958 ntBASIC31.59■■■□□ 2.65
PdgfcQ8CI19 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
PdgfcQ8CI19 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
PdgfcQ8CI19 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC31.56■■■□□ 2.64
PdgfcQ8CI19 CT025624.2-201ENSMUST00000223609 1909 ntBASIC31.55■■■□□ 2.64
PdgfcQ8CI19 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC31.54■■■□□ 2.64
PdgfcQ8CI19 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC31.52■■■□□ 2.64
PdgfcQ8CI19 Gm27322-201ENSMUST00000184007 104 ntBASIC31.49■■■□□ 2.63
PdgfcQ8CI19 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
PdgfcQ8CI19 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
PdgfcQ8CI19 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
PdgfcQ8CI19 Gm24804-201ENSMUST00000174982 85 ntBASIC31.38■■■□□ 2.61
PdgfcQ8CI19 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC31.37■■■□□ 2.61
PdgfcQ8CI19 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
PdgfcQ8CI19 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC31.24■■■□□ 2.59
PdgfcQ8CI19 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC31.22■■■□□ 2.59
PdgfcQ8CI19 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
PdgfcQ8CI19 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
PdgfcQ8CI19 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
PdgfcQ8CI19 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
PdgfcQ8CI19 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
PdgfcQ8CI19 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC31.03■■■□□ 2.56
PdgfcQ8CI19 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC31.01■■■□□ 2.55
PdgfcQ8CI19 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
PdgfcQ8CI19 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
PdgfcQ8CI19 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
PdgfcQ8CI19 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC30.88■■■□□ 2.53
PdgfcQ8CI19 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC30.88■■■□□ 2.53
PdgfcQ8CI19 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
PdgfcQ8CI19 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC30.86■■■□□ 2.53
PdgfcQ8CI19 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC30.85■■■□□ 2.53
PdgfcQ8CI19 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
PdgfcQ8CI19 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC30.81■■■□□ 2.52
PdgfcQ8CI19 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
PdgfcQ8CI19 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
PdgfcQ8CI19 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
PdgfcQ8CI19 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
PdgfcQ8CI19 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
PdgfcQ8CI19 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
PdgfcQ8CI19 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC30.75■■■□□ 2.51
PdgfcQ8CI19 AL845457.1-201ENSMUST00000197244 68 ntBASIC30.74■■■□□ 2.51
PdgfcQ8CI19 AC166822.3-201ENSMUST00000227394 661 ntBASIC30.73■■■□□ 2.51
PdgfcQ8CI19 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
PdgfcQ8CI19 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
PdgfcQ8CI19 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
PdgfcQ8CI19 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC30.71■■■□□ 2.51
PdgfcQ8CI19 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
PdgfcQ8CI19 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
PdgfcQ8CI19 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
PdgfcQ8CI19 Zfp131-205ENSMUST00000223812 663 ntBASIC30.61■■■□□ 2.49
PdgfcQ8CI19 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
PdgfcQ8CI19 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
PdgfcQ8CI19 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
PdgfcQ8CI19 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
PdgfcQ8CI19 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC30.48■■■□□ 2.47
PdgfcQ8CI19 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC30.47■■■□□ 2.47
PdgfcQ8CI19 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC30.46■■■□□ 2.47
PdgfcQ8CI19 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
PdgfcQ8CI19 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC30.42■■■□□ 2.46
PdgfcQ8CI19 Zfp131-207ENSMUST00000224946 1783 ntBASIC30.36■■■□□ 2.45
PdgfcQ8CI19 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
PdgfcQ8CI19 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
PdgfcQ8CI19 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC30.31■■■□□ 2.44
PdgfcQ8CI19 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
PdgfcQ8CI19 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
PdgfcQ8CI19 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
PdgfcQ8CI19 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC30.28■■■□□ 2.44
PdgfcQ8CI19 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
PdgfcQ8CI19 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC30.23■■■□□ 2.43
PdgfcQ8CI19 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
PdgfcQ8CI19 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
PdgfcQ8CI19 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC30.14■■■□□ 2.42
PdgfcQ8CI19 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC30.14■■■□□ 2.42
PdgfcQ8CI19 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC30.14■■■□□ 2.42
PdgfcQ8CI19 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
PdgfcQ8CI19 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
PdgfcQ8CI19 Gm16148-201ENSMUST00000119653 893 ntBASIC30.11■■■□□ 2.41
PdgfcQ8CI19 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC30.08■■■□□ 2.41
PdgfcQ8CI19 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
PdgfcQ8CI19 Peli2-204ENSMUST00000226513 1320 ntBASIC30.05■■■□□ 2.4
PdgfcQ8CI19 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC30.04■■■□□ 2.4
PdgfcQ8CI19 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
PdgfcQ8CI19 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
PdgfcQ8CI19 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
PdgfcQ8CI19 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
PdgfcQ8CI19 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC30.01■■■□□ 2.4
PdgfcQ8CI19 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC30.01■■■□□ 2.4
PdgfcQ8CI19 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC29.98■■■□□ 2.39
PdgfcQ8CI19 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
PdgfcQ8CI19 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
PdgfcQ8CI19 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC29.94■■■□□ 2.38
PdgfcQ8CI19 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC29.92■■■□□ 2.38
PdgfcQ8CI19 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
PdgfcQ8CI19 Mipep-204ENSMUST00000225043 1548 ntBASIC29.91■■■□□ 2.38
PdgfcQ8CI19 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC29.9■■■□□ 2.38
PdgfcQ8CI19 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
PdgfcQ8CI19 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC29.88■■■□□ 2.37
PdgfcQ8CI19 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
Retrieved 100 of 76,532 protein–RNA pairs in 67.5 ms