Protein–RNA interactions for Protein: Q8CGC4

Lsm14b, Protein LSM14 homolog B, mousemouse

Known RBP Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm14bQ8CGC4 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC28.45■■■□□ 2.14
Lsm14bQ8CGC4 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
Lsm14bQ8CGC4 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Lsm14bQ8CGC4 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC28.37■■■□□ 2.13
Lsm14bQ8CGC4 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC28.33■■■□□ 2.12
Lsm14bQ8CGC4 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
Lsm14bQ8CGC4 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Lsm14bQ8CGC4 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC28.23■■■□□ 2.11
Lsm14bQ8CGC4 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC28.2■■■□□ 2.1
Lsm14bQ8CGC4 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC28.2■■■□□ 2.1
Lsm14bQ8CGC4 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC28.19■■■□□ 2.1
Lsm14bQ8CGC4 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Lsm14bQ8CGC4 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC28.08■■■□□ 2.09
Lsm14bQ8CGC4 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC28.07■■■□□ 2.08
Lsm14bQ8CGC4 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Lsm14bQ8CGC4 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC28.04■■■□□ 2.08
Lsm14bQ8CGC4 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Lsm14bQ8CGC4 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
Lsm14bQ8CGC4 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
Lsm14bQ8CGC4 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
Lsm14bQ8CGC4 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
Lsm14bQ8CGC4 Gm25238-201ENSMUST00000174914 89 ntBASIC27.94■■■□□ 2.06
Lsm14bQ8CGC4 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
Lsm14bQ8CGC4 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
Lsm14bQ8CGC4 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
Lsm14bQ8CGC4 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC27.84■■■□□ 2.05
Lsm14bQ8CGC4 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC27.83■■■□□ 2.05
Lsm14bQ8CGC4 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC27.82■■■□□ 2.04
Lsm14bQ8CGC4 AC153504.1-201ENSMUST00000218379 2290 ntBASIC27.79■■■□□ 2.04
Lsm14bQ8CGC4 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Lsm14bQ8CGC4 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
Lsm14bQ8CGC4 Gm2415-204ENSMUST00000190235 2004 ntBASIC27.72■■■□□ 2.03
Lsm14bQ8CGC4 Gm27325-201ENSMUST00000175467 74 ntBASIC27.69■■■□□ 2.02
Lsm14bQ8CGC4 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
Lsm14bQ8CGC4 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
Lsm14bQ8CGC4 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
Lsm14bQ8CGC4 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC27.54■■■□□ 2
Lsm14bQ8CGC4 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Lsm14bQ8CGC4 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Lsm14bQ8CGC4 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Lsm14bQ8CGC4 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
Lsm14bQ8CGC4 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
Lsm14bQ8CGC4 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC27.48■■□□□ 1.99
Lsm14bQ8CGC4 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
Lsm14bQ8CGC4 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC27.48■■□□□ 1.99
Lsm14bQ8CGC4 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Lsm14bQ8CGC4 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC27.47■■□□□ 1.99
Lsm14bQ8CGC4 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
Lsm14bQ8CGC4 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Lsm14bQ8CGC4 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
Lsm14bQ8CGC4 Gm6658-202ENSMUST00000209493 1885 ntBASIC27.44■■□□□ 1.98
Lsm14bQ8CGC4 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
Lsm14bQ8CGC4 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC27.42■■□□□ 1.98
Lsm14bQ8CGC4 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC27.42■■□□□ 1.98
Lsm14bQ8CGC4 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Lsm14bQ8CGC4 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Lsm14bQ8CGC4 Zfp131-207ENSMUST00000224946 1783 ntBASIC27.39■■□□□ 1.98
Lsm14bQ8CGC4 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
Lsm14bQ8CGC4 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC27.39■■□□□ 1.97
Lsm14bQ8CGC4 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Lsm14bQ8CGC4 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Lsm14bQ8CGC4 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Lsm14bQ8CGC4 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC27.34■■□□□ 1.97
Lsm14bQ8CGC4 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC27.32■■□□□ 1.96
Lsm14bQ8CGC4 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC27.31■■□□□ 1.96
Lsm14bQ8CGC4 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC27.31■■□□□ 1.96
Lsm14bQ8CGC4 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
Lsm14bQ8CGC4 Gm25262-201ENSMUST00000174934 133 ntBASIC27.29■■□□□ 1.96
Lsm14bQ8CGC4 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC27.27■■□□□ 1.96
Lsm14bQ8CGC4 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Lsm14bQ8CGC4 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
Lsm14bQ8CGC4 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Lsm14bQ8CGC4 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC27.22■■□□□ 1.95
Lsm14bQ8CGC4 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC27.22■■□□□ 1.95
Lsm14bQ8CGC4 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC27.2■■□□□ 1.94
Lsm14bQ8CGC4 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
Lsm14bQ8CGC4 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC27.19■■□□□ 1.94
Lsm14bQ8CGC4 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
Lsm14bQ8CGC4 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Lsm14bQ8CGC4 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC27.12■■□□□ 1.93
Lsm14bQ8CGC4 Zxda-201ENSMUST00000117281 2621 ntBASIC27.11■■□□□ 1.93
Lsm14bQ8CGC4 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Lsm14bQ8CGC4 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC27.1■■□□□ 1.93
Lsm14bQ8CGC4 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Lsm14bQ8CGC4 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC27.09■■□□□ 1.93
Lsm14bQ8CGC4 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC27.09■■□□□ 1.93
Lsm14bQ8CGC4 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC27.08■■□□□ 1.93
Lsm14bQ8CGC4 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Lsm14bQ8CGC4 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC27.06■■□□□ 1.92
Lsm14bQ8CGC4 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC27.03■■□□□ 1.92
Lsm14bQ8CGC4 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Lsm14bQ8CGC4 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
Lsm14bQ8CGC4 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Lsm14bQ8CGC4 Gm26115-201ENSMUST00000175605 87 ntBASIC27.02■■□□□ 1.92
Lsm14bQ8CGC4 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC27.01■■□□□ 1.91
Lsm14bQ8CGC4 Gm6206-201ENSMUST00000133472 2199 ntBASIC27.01■■□□□ 1.91
Lsm14bQ8CGC4 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC27.01■■□□□ 1.91
Lsm14bQ8CGC4 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC26.99■■□□□ 1.91
Lsm14bQ8CGC4 Gm9905-201ENSMUST00000065740 1845 ntBASIC26.97■■□□□ 1.91
Lsm14bQ8CGC4 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC26.97■■□□□ 1.91
Retrieved 100 of 76,532 protein–RNA pairs in 13.3 ms