Protein–RNA interactions for Protein: Q8CCS6

Pabpn1, Polyadenylate-binding protein 2, mousemouse

Known RBP Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1Q8CCS6 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC46.49■■■■■ 5.03
Pabpn1Q8CCS6 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC46.43■■■■■ 5.02
Pabpn1Q8CCS6 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC46.41■■■■■ 5.02
Pabpn1Q8CCS6 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC46.4■■■■■ 5.02
Pabpn1Q8CCS6 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC46.39■■■■■ 5.02
Pabpn1Q8CCS6 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC46.35■■■■■ 5.01
Pabpn1Q8CCS6 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC46.32■■■■■ 5.01
Pabpn1Q8CCS6 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC46.15■■■■■ 4.98
Pabpn1Q8CCS6 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC46.14■■■■■ 4.98
Pabpn1Q8CCS6 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC46.1■■■■■ 4.97
Pabpn1Q8CCS6 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC46.1■■■■■ 4.97
Pabpn1Q8CCS6 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC46■■■■■ 4.95
Pabpn1Q8CCS6 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC45.95■■■■■ 4.95
Pabpn1Q8CCS6 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC45.94■■■■■ 4.95
Pabpn1Q8CCS6 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC45.94■■■■■ 4.94
Pabpn1Q8CCS6 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC45.93■■■■■ 4.94
Pabpn1Q8CCS6 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC45.92■■■■■ 4.94
Pabpn1Q8CCS6 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC45.82■■■■■ 4.93
Pabpn1Q8CCS6 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC45.78■■■■■ 4.92
Pabpn1Q8CCS6 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC45.75■■■■■ 4.91
Pabpn1Q8CCS6 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC45.69■■■■■ 4.9
Pabpn1Q8CCS6 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC45.67■■■■■ 4.9
Pabpn1Q8CCS6 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC45.67■■■■■ 4.9
Pabpn1Q8CCS6 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC45.65■■■■■ 4.9
Pabpn1Q8CCS6 Tdp2-203ENSMUST00000223804 1136 ntBASIC45.64■■■■■ 4.9
Pabpn1Q8CCS6 Gm5987-201ENSMUST00000196433 1151 ntBASIC45.62■■■■■ 4.89
Pabpn1Q8CCS6 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC45.6■■■■■ 4.89
Pabpn1Q8CCS6 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC45.58■■■■■ 4.89
Pabpn1Q8CCS6 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC45.56■■■■■ 4.88
Pabpn1Q8CCS6 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC45.55■■■■■ 4.88
Pabpn1Q8CCS6 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC45.54■■■■■ 4.88
Pabpn1Q8CCS6 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC45.53■■■■■ 4.88
Pabpn1Q8CCS6 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC45.46■■■■■ 4.87
Pabpn1Q8CCS6 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC45.45■■■■■ 4.87
Pabpn1Q8CCS6 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC45.4■■■■■ 4.86
Pabpn1Q8CCS6 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC45.35■■■■■ 4.85
Pabpn1Q8CCS6 AC166822.3-201ENSMUST00000227394 661 ntBASIC45.29■■■■■ 4.84
Pabpn1Q8CCS6 Gm16148-201ENSMUST00000119653 893 ntBASIC45.24■■■■■ 4.83
Pabpn1Q8CCS6 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC45.22■■■■■ 4.83
Pabpn1Q8CCS6 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC45.2■■■■■ 4.83
Pabpn1Q8CCS6 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC45.17■■■■■ 4.82
Pabpn1Q8CCS6 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC45.14■■■■■ 4.82
Pabpn1Q8CCS6 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC45.13■■■■■ 4.82
Pabpn1Q8CCS6 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC45.12■■■■■ 4.81
Pabpn1Q8CCS6 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC45.12■■■■■ 4.81
Pabpn1Q8CCS6 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC45.11■■■■■ 4.81
Pabpn1Q8CCS6 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC45.04■■■■■ 4.8
Pabpn1Q8CCS6 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC45.03■■■■■ 4.8
Pabpn1Q8CCS6 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC45.01■■■■■ 4.8
Pabpn1Q8CCS6 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC44.99■■■■■ 4.79
Pabpn1Q8CCS6 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC44.98■■■■■ 4.79
Pabpn1Q8CCS6 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC44.98■■■■■ 4.79
Pabpn1Q8CCS6 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC44.97■■■■■ 4.79
Pabpn1Q8CCS6 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC44.94■■■■■ 4.78
Pabpn1Q8CCS6 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC44.92■■■■■ 4.78
Pabpn1Q8CCS6 Gm45855-201ENSMUST00000212546 880 ntBASIC44.91■■■■■ 4.78
Pabpn1Q8CCS6 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC44.91■■■■■ 4.78
Pabpn1Q8CCS6 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC44.84■■■■■ 4.77
Pabpn1Q8CCS6 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC44.81■■■■■ 4.76
Pabpn1Q8CCS6 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC44.8■■■■■ 4.76
Pabpn1Q8CCS6 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC44.76■■■■■ 4.76
Pabpn1Q8CCS6 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC44.76■■■■■ 4.76
Pabpn1Q8CCS6 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC44.74■■■■■ 4.75
Pabpn1Q8CCS6 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC44.74■■■■■ 4.75
Pabpn1Q8CCS6 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC44.71■■■■■ 4.75
Pabpn1Q8CCS6 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC44.7■■■■■ 4.75
Pabpn1Q8CCS6 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC44.68■■■■■ 4.74
Pabpn1Q8CCS6 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC44.66■■■■■ 4.74
Pabpn1Q8CCS6 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC44.63■■■■■ 4.73
Pabpn1Q8CCS6 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC44.6■■■■■ 4.73
Pabpn1Q8CCS6 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC44.58■■■■■ 4.73
Pabpn1Q8CCS6 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC44.55■■■■■ 4.72
Pabpn1Q8CCS6 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC44.5■■■■■ 4.71
Pabpn1Q8CCS6 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC44.49■■■■■ 4.71
Pabpn1Q8CCS6 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC44.47■■■■■ 4.71
Pabpn1Q8CCS6 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC44.47■■■■■ 4.71
Pabpn1Q8CCS6 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC44.43■■■■■ 4.7
Pabpn1Q8CCS6 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC44.41■■■■■ 4.7
Pabpn1Q8CCS6 AL845457.1-201ENSMUST00000197244 68 ntBASIC44.41■■■■■ 4.7
Pabpn1Q8CCS6 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC44.39■■■■■ 4.7
Pabpn1Q8CCS6 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC44.39■■■■■ 4.7
Pabpn1Q8CCS6 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC44.39■■■■■ 4.7
Pabpn1Q8CCS6 Psd-208ENSMUST00000224556 2034 ntBASIC44.33■■■■■ 4.69
Pabpn1Q8CCS6 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC44.32■■■■■ 4.68
Pabpn1Q8CCS6 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC44.29■■■■■ 4.68
Pabpn1Q8CCS6 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC44.29■■■■■ 4.68
Pabpn1Q8CCS6 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC44.27■■■■■ 4.68
Pabpn1Q8CCS6 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC44.24■■■■■ 4.67
Pabpn1Q8CCS6 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC44.23■■■■■ 4.67
Pabpn1Q8CCS6 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC44.23■■■■■ 4.67
Pabpn1Q8CCS6 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC44.21■■■■■ 4.67
Pabpn1Q8CCS6 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC44.2■■■■■ 4.67
Pabpn1Q8CCS6 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC44.19■■■■■ 4.67
Pabpn1Q8CCS6 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC44.19■■■■■ 4.66
Pabpn1Q8CCS6 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC44.19■■■■■ 4.66
Pabpn1Q8CCS6 Peli2-204ENSMUST00000226513 1320 ntBASIC44.19■■■■■ 4.66
Pabpn1Q8CCS6 Gm9397-201ENSMUST00000200125 605 ntBASIC44.18■■■■■ 4.66
Pabpn1Q8CCS6 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC44.16■■■■■ 4.66
Pabpn1Q8CCS6 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC44.15■■■■■ 4.66
Pabpn1Q8CCS6 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC44.13■■■■■ 4.66
Retrieved 100 of 76,532 protein–RNA pairs in 12.3 ms