Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Lysmd4Q8CC84 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC24.71■■□□□ 1.55
Lysmd4Q8CC84 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Lysmd4Q8CC84 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Lysmd4Q8CC84 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC24.64■■□□□ 1.54
Lysmd4Q8CC84 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC24.64■■□□□ 1.53
Lysmd4Q8CC84 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC24.64■■□□□ 1.53
Lysmd4Q8CC84 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Lysmd4Q8CC84 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Lysmd4Q8CC84 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Lysmd4Q8CC84 Gm27325-201ENSMUST00000175467 74 ntBASIC24.51■■□□□ 1.51
Lysmd4Q8CC84 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC24.49■■□□□ 1.51
Lysmd4Q8CC84 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Lysmd4Q8CC84 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Lysmd4Q8CC84 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Lysmd4Q8CC84 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC24.47■■□□□ 1.51
Lysmd4Q8CC84 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
Lysmd4Q8CC84 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC24.39■■□□□ 1.49
Lysmd4Q8CC84 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC24.38■■□□□ 1.49
Lysmd4Q8CC84 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Lysmd4Q8CC84 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
Lysmd4Q8CC84 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Lysmd4Q8CC84 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Lysmd4Q8CC84 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Lysmd4Q8CC84 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Lysmd4Q8CC84 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Lysmd4Q8CC84 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC24.22■■□□□ 1.47
Lysmd4Q8CC84 Gm2415-204ENSMUST00000190235 2004 ntBASIC24.2■■□□□ 1.47
Lysmd4Q8CC84 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Lysmd4Q8CC84 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Lysmd4Q8CC84 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC24.18■■□□□ 1.46
Lysmd4Q8CC84 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC24.15■■□□□ 1.46
Lysmd4Q8CC84 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC24.13■■□□□ 1.45
Lysmd4Q8CC84 AC153504.1-201ENSMUST00000218379 2290 ntBASIC24.13■■□□□ 1.45
Lysmd4Q8CC84 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Lysmd4Q8CC84 Zfp131-207ENSMUST00000224946 1783 ntBASIC24.11■■□□□ 1.45
Lysmd4Q8CC84 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Lysmd4Q8CC84 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Lysmd4Q8CC84 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Lysmd4Q8CC84 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Lysmd4Q8CC84 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Lysmd4Q8CC84 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC24.04■■□□□ 1.44
Lysmd4Q8CC84 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Lysmd4Q8CC84 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Lysmd4Q8CC84 Gm6658-202ENSMUST00000209493 1885 ntBASIC24.01■■□□□ 1.43
Lysmd4Q8CC84 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC24■■□□□ 1.43
Lysmd4Q8CC84 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Lysmd4Q8CC84 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC23.98■■□□□ 1.43
Lysmd4Q8CC84 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC23.97■■□□□ 1.43
Lysmd4Q8CC84 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC23.97■■□□□ 1.43
Lysmd4Q8CC84 Gm25238-201ENSMUST00000174914 89 ntBASIC23.96■■□□□ 1.43
Lysmd4Q8CC84 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Lysmd4Q8CC84 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC23.93■■□□□ 1.42
Lysmd4Q8CC84 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Lysmd4Q8CC84 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Lysmd4Q8CC84 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Lysmd4Q8CC84 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Lysmd4Q8CC84 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
Lysmd4Q8CC84 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
Lysmd4Q8CC84 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Lysmd4Q8CC84 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Lysmd4Q8CC84 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC23.86■■□□□ 1.41
Lysmd4Q8CC84 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Lysmd4Q8CC84 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC23.82■■□□□ 1.4
Lysmd4Q8CC84 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC23.8■■□□□ 1.4
Lysmd4Q8CC84 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Lysmd4Q8CC84 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Lysmd4Q8CC84 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC23.77■■□□□ 1.4
Lysmd4Q8CC84 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Lysmd4Q8CC84 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Lysmd4Q8CC84 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
Lysmd4Q8CC84 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Lysmd4Q8CC84 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Lysmd4Q8CC84 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Lysmd4Q8CC84 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Lysmd4Q8CC84 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Lysmd4Q8CC84 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC23.67■■□□□ 1.38
Lysmd4Q8CC84 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Lysmd4Q8CC84 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Lysmd4Q8CC84 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Lysmd4Q8CC84 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.37
Lysmd4Q8CC84 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Lysmd4Q8CC84 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
Lysmd4Q8CC84 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
Lysmd4Q8CC84 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
Lysmd4Q8CC84 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
Lysmd4Q8CC84 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.37
Lysmd4Q8CC84 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Lysmd4Q8CC84 Gm9905-201ENSMUST00000065740 1845 ntBASIC23.55■■□□□ 1.36
Lysmd4Q8CC84 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC23.55■■□□□ 1.36
Lysmd4Q8CC84 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Lysmd4Q8CC84 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.36
Lysmd4Q8CC84 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC23.52■■□□□ 1.36
Lysmd4Q8CC84 Gm6206-201ENSMUST00000133472 2199 ntBASIC23.52■■□□□ 1.36
Lysmd4Q8CC84 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Lysmd4Q8CC84 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Lysmd4Q8CC84 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Lysmd4Q8CC84 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC23.47■■□□□ 1.35
Lysmd4Q8CC84 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
Lysmd4Q8CC84 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms