Protein–RNA interactions for Protein: Q8CBG9

Rnf170, E3 ubiquitin-protein ligase RNF170, mousemouse

Predictions only

Length 286 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf170Q8CBG9 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC22.94■■□□□ 1.26
Rnf170Q8CBG9 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Rnf170Q8CBG9 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Rnf170Q8CBG9 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Rnf170Q8CBG9 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC22.89■■□□□ 1.25
Rnf170Q8CBG9 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC22.88■■□□□ 1.25
Rnf170Q8CBG9 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Rnf170Q8CBG9 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Rnf170Q8CBG9 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Rnf170Q8CBG9 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Rnf170Q8CBG9 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC22.81■■□□□ 1.24
Rnf170Q8CBG9 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Rnf170Q8CBG9 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
Rnf170Q8CBG9 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC22.76■■□□□ 1.23
Rnf170Q8CBG9 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Rnf170Q8CBG9 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC22.71■■□□□ 1.23
Rnf170Q8CBG9 Rab21-202ENSMUST00000218831 843 ntBASIC22.7■■□□□ 1.22
Rnf170Q8CBG9 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC22.68■■□□□ 1.22
Rnf170Q8CBG9 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Rnf170Q8CBG9 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
Rnf170Q8CBG9 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Rnf170Q8CBG9 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
Rnf170Q8CBG9 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Rnf170Q8CBG9 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Rnf170Q8CBG9 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC22.61■■□□□ 1.21
Rnf170Q8CBG9 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
Rnf170Q8CBG9 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC22.58■■□□□ 1.21
Rnf170Q8CBG9 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Rnf170Q8CBG9 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Rnf170Q8CBG9 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Rnf170Q8CBG9 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Rnf170Q8CBG9 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Rnf170Q8CBG9 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Rnf170Q8CBG9 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
Rnf170Q8CBG9 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Rnf170Q8CBG9 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Rnf170Q8CBG9 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC22.4■■□□□ 1.18
Rnf170Q8CBG9 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Rnf170Q8CBG9 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Rnf170Q8CBG9 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC22.35■■□□□ 1.17
Rnf170Q8CBG9 Gm25262-201ENSMUST00000174934 133 ntBASIC22.34■■□□□ 1.17
Rnf170Q8CBG9 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
Rnf170Q8CBG9 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Rnf170Q8CBG9 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC22.32■■□□□ 1.16
Rnf170Q8CBG9 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Rnf170Q8CBG9 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
Rnf170Q8CBG9 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Rnf170Q8CBG9 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Rnf170Q8CBG9 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Rnf170Q8CBG9 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC22.27■■□□□ 1.16
Rnf170Q8CBG9 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Rnf170Q8CBG9 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
Rnf170Q8CBG9 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Rnf170Q8CBG9 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Rnf170Q8CBG9 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Rnf170Q8CBG9 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Rnf170Q8CBG9 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC22.23■■□□□ 1.15
Rnf170Q8CBG9 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC22.22■■□□□ 1.15
Rnf170Q8CBG9 Zfp131-207ENSMUST00000224946 1783 ntBASIC22.18■■□□□ 1.14
Rnf170Q8CBG9 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Rnf170Q8CBG9 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Rnf170Q8CBG9 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Rnf170Q8CBG9 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Rnf170Q8CBG9 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC22.12■■□□□ 1.13
Rnf170Q8CBG9 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Rnf170Q8CBG9 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
Rnf170Q8CBG9 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
Rnf170Q8CBG9 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Rnf170Q8CBG9 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC22.09■■□□□ 1.13
Rnf170Q8CBG9 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC22.08■■□□□ 1.13
Rnf170Q8CBG9 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Rnf170Q8CBG9 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Rnf170Q8CBG9 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Rnf170Q8CBG9 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC22.04■■□□□ 1.12
Rnf170Q8CBG9 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC22.01■■□□□ 1.11
Rnf170Q8CBG9 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC22■■□□□ 1.11
Rnf170Q8CBG9 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Rnf170Q8CBG9 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Rnf170Q8CBG9 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Rnf170Q8CBG9 Gm2415-204ENSMUST00000190235 2004 ntBASIC21.94■■□□□ 1.1
Rnf170Q8CBG9 AC153504.1-201ENSMUST00000218379 2290 ntBASIC21.94■■□□□ 1.1
Rnf170Q8CBG9 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC21.91■■□□□ 1.1
Rnf170Q8CBG9 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Rnf170Q8CBG9 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC21.89■■□□□ 1.09
Rnf170Q8CBG9 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
Rnf170Q8CBG9 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Rnf170Q8CBG9 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Rnf170Q8CBG9 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Rnf170Q8CBG9 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Rnf170Q8CBG9 AL845457.1-201ENSMUST00000197244 68 ntBASIC21.84■■□□□ 1.09
Rnf170Q8CBG9 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Rnf170Q8CBG9 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Rnf170Q8CBG9 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC21.82■■□□□ 1.08
Rnf170Q8CBG9 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Rnf170Q8CBG9 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Rnf170Q8CBG9 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC21.79■■□□□ 1.08
Rnf170Q8CBG9 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
Rnf170Q8CBG9 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Rnf170Q8CBG9 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Rnf170Q8CBG9 Gm6658-202ENSMUST00000209493 1885 ntBASIC21.76■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms