Protein–RNA interactions for Protein: Q8C7R7

Rfx6, DNA-binding protein RFX6, mousemouse

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx6Q8C7R7 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
Rfx6Q8C7R7 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC27.76■■■□□ 2.03
Rfx6Q8C7R7 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC27.75■■■□□ 2.03
Rfx6Q8C7R7 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC27.73■■■□□ 2.03
Rfx6Q8C7R7 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC27.72■■■□□ 2.03
Rfx6Q8C7R7 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
Rfx6Q8C7R7 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
Rfx6Q8C7R7 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC27.7■■■□□ 2.02
Rfx6Q8C7R7 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
Rfx6Q8C7R7 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC27.64■■■□□ 2.02
Rfx6Q8C7R7 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
Rfx6Q8C7R7 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
Rfx6Q8C7R7 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC27.55■■■□□ 2
Rfx6Q8C7R7 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
Rfx6Q8C7R7 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC27.49■■□□□ 1.99
Rfx6Q8C7R7 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
Rfx6Q8C7R7 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC27.48■■□□□ 1.99
Rfx6Q8C7R7 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
Rfx6Q8C7R7 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Rfx6Q8C7R7 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Rfx6Q8C7R7 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC27.38■■□□□ 1.97
Rfx6Q8C7R7 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Rfx6Q8C7R7 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Rfx6Q8C7R7 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC27.36■■□□□ 1.97
Rfx6Q8C7R7 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Rfx6Q8C7R7 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC27.36■■□□□ 1.97
Rfx6Q8C7R7 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC27.34■■□□□ 1.97
Rfx6Q8C7R7 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC27.32■■□□□ 1.96
Rfx6Q8C7R7 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC27.31■■□□□ 1.96
Rfx6Q8C7R7 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC27.29■■□□□ 1.96
Rfx6Q8C7R7 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC27.28■■□□□ 1.96
Rfx6Q8C7R7 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Rfx6Q8C7R7 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC27.27■■□□□ 1.96
Rfx6Q8C7R7 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC27.26■■□□□ 1.95
Rfx6Q8C7R7 Zfp131-207ENSMUST00000224946 1783 ntBASIC27.22■■□□□ 1.95
Rfx6Q8C7R7 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Rfx6Q8C7R7 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC27.12■■□□□ 1.93
Rfx6Q8C7R7 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC27.12■■□□□ 1.93
Rfx6Q8C7R7 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Rfx6Q8C7R7 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC27.1■■□□□ 1.93
Rfx6Q8C7R7 Rab21-202ENSMUST00000218831 843 ntBASIC27.07■■□□□ 1.92
Rfx6Q8C7R7 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Rfx6Q8C7R7 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
Rfx6Q8C7R7 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Rfx6Q8C7R7 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC27.01■■□□□ 1.91
Rfx6Q8C7R7 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC27■■□□□ 1.91
Rfx6Q8C7R7 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Rfx6Q8C7R7 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC26.96■■□□□ 1.91
Rfx6Q8C7R7 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC26.96■■□□□ 1.91
Rfx6Q8C7R7 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC26.95■■□□□ 1.9
Rfx6Q8C7R7 Gm2415-204ENSMUST00000190235 2004 ntBASIC26.95■■□□□ 1.9
Rfx6Q8C7R7 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
Rfx6Q8C7R7 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC26.93■■□□□ 1.9
Rfx6Q8C7R7 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Rfx6Q8C7R7 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC26.93■■□□□ 1.9
Rfx6Q8C7R7 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC26.93■■□□□ 1.9
Rfx6Q8C7R7 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Rfx6Q8C7R7 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
Rfx6Q8C7R7 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Rfx6Q8C7R7 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC26.88■■□□□ 1.89
Rfx6Q8C7R7 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
Rfx6Q8C7R7 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC26.85■■□□□ 1.89
Rfx6Q8C7R7 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC26.83■■□□□ 1.89
Rfx6Q8C7R7 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
Rfx6Q8C7R7 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
Rfx6Q8C7R7 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Rfx6Q8C7R7 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC26.78■■□□□ 1.88
Rfx6Q8C7R7 Gm6658-202ENSMUST00000209493 1885 ntBASIC26.77■■□□□ 1.88
Rfx6Q8C7R7 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
Rfx6Q8C7R7 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Rfx6Q8C7R7 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC26.75■■□□□ 1.87
Rfx6Q8C7R7 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Rfx6Q8C7R7 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
Rfx6Q8C7R7 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Rfx6Q8C7R7 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Rfx6Q8C7R7 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC26.69■■□□□ 1.86
Rfx6Q8C7R7 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC26.69■■□□□ 1.86
Rfx6Q8C7R7 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC26.68■■□□□ 1.86
Rfx6Q8C7R7 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC26.67■■□□□ 1.86
Rfx6Q8C7R7 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC26.67■■□□□ 1.86
Rfx6Q8C7R7 AC153504.1-201ENSMUST00000218379 2290 ntBASIC26.67■■□□□ 1.86
Rfx6Q8C7R7 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Rfx6Q8C7R7 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Rfx6Q8C7R7 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Rfx6Q8C7R7 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC26.59■■□□□ 1.85
Rfx6Q8C7R7 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC26.59■■□□□ 1.85
Rfx6Q8C7R7 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Rfx6Q8C7R7 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
Rfx6Q8C7R7 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
Rfx6Q8C7R7 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
Rfx6Q8C7R7 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
Rfx6Q8C7R7 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC26.5■■□□□ 1.83
Rfx6Q8C7R7 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
Rfx6Q8C7R7 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Rfx6Q8C7R7 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
Rfx6Q8C7R7 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Rfx6Q8C7R7 AL845457.1-201ENSMUST00000197244 68 ntBASIC26.43■■□□□ 1.82
Rfx6Q8C7R7 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
Rfx6Q8C7R7 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC26.42■■□□□ 1.82
Rfx6Q8C7R7 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC26.41■■□□□ 1.82
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms