Protein–RNA interactions for Protein: Q8C2S7

Amigo3, Amphoterin-induced protein 3, mousemouse

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Amigo3Q8C2S7 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC39.76■■■■□ 3.96
Amigo3Q8C2S7 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC39.72■■■■□ 3.95
Amigo3Q8C2S7 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC39.7■■■■□ 3.95
Amigo3Q8C2S7 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC39.7■■■■□ 3.95
Amigo3Q8C2S7 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC39.68■■■■□ 3.94
Amigo3Q8C2S7 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC39.66■■■■□ 3.94
Amigo3Q8C2S7 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC39.55■■■■□ 3.92
Amigo3Q8C2S7 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC39.54■■■■□ 3.92
Amigo3Q8C2S7 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC39.49■■■■□ 3.91
Amigo3Q8C2S7 Psd-208ENSMUST00000224556 2034 ntBASIC39.47■■■■□ 3.91
Amigo3Q8C2S7 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC39.38■■■■□ 3.89
Amigo3Q8C2S7 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC39.37■■■■□ 3.89
Amigo3Q8C2S7 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC39.29■■■■□ 3.88
Amigo3Q8C2S7 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC39.25■■■■□ 3.87
Amigo3Q8C2S7 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC39.23■■■■□ 3.87
Amigo3Q8C2S7 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC39.2■■■■□ 3.87
Amigo3Q8C2S7 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC39.16■■■■□ 3.86
Amigo3Q8C2S7 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC39.1■■■■□ 3.85
Amigo3Q8C2S7 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC39.08■■■■□ 3.85
Amigo3Q8C2S7 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC39.07■■■■□ 3.85
Amigo3Q8C2S7 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC39.07■■■■□ 3.84
Amigo3Q8C2S7 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC39.06■■■■□ 3.84
Amigo3Q8C2S7 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC39.04■■■■□ 3.84
Amigo3Q8C2S7 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC39.02■■■■□ 3.84
Amigo3Q8C2S7 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC39.01■■■■□ 3.84
Amigo3Q8C2S7 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC38.99■■■■□ 3.83
Amigo3Q8C2S7 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC38.98■■■■□ 3.83
Amigo3Q8C2S7 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC38.85■■■■□ 3.81
Amigo3Q8C2S7 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC38.83■■■■□ 3.81
Amigo3Q8C2S7 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC38.82■■■■□ 3.8
Amigo3Q8C2S7 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC38.81■■■■□ 3.8
Amigo3Q8C2S7 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC38.79■■■■□ 3.8
Amigo3Q8C2S7 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC38.76■■■■□ 3.8
Amigo3Q8C2S7 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC38.75■■■■□ 3.79
Amigo3Q8C2S7 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC38.73■■■■□ 3.79
Amigo3Q8C2S7 AC166822.3-201ENSMUST00000227394 661 ntBASIC38.72■■■■□ 3.79
Amigo3Q8C2S7 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC38.7■■■■□ 3.79
Amigo3Q8C2S7 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC38.7■■■■□ 3.78
Amigo3Q8C2S7 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC38.64■■■■□ 3.78
Amigo3Q8C2S7 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC38.63■■■■□ 3.77
Amigo3Q8C2S7 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC38.56■■■■□ 3.76
Amigo3Q8C2S7 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC38.55■■■■□ 3.76
Amigo3Q8C2S7 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC38.54■■■■□ 3.76
Amigo3Q8C2S7 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC38.53■■■■□ 3.76
Amigo3Q8C2S7 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC38.49■■■■□ 3.75
Amigo3Q8C2S7 Tdp2-203ENSMUST00000223804 1136 ntBASIC38.47■■■■□ 3.75
Amigo3Q8C2S7 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC38.44■■■■□ 3.74
Amigo3Q8C2S7 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC38.38■■■■□ 3.74
Amigo3Q8C2S7 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC38.37■■■■□ 3.73
Amigo3Q8C2S7 Gm16148-201ENSMUST00000119653 893 ntBASIC38.36■■■■□ 3.73
Amigo3Q8C2S7 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC38.34■■■■□ 3.73
Amigo3Q8C2S7 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC38.33■■■■□ 3.73
Amigo3Q8C2S7 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC38.33■■■■□ 3.73
Amigo3Q8C2S7 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC38.31■■■■□ 3.72
Amigo3Q8C2S7 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC38.3■■■■□ 3.72
Amigo3Q8C2S7 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC38.3■■■■□ 3.72
Amigo3Q8C2S7 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC38.28■■■■□ 3.72
Amigo3Q8C2S7 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC38.25■■■■□ 3.71
Amigo3Q8C2S7 AL845457.1-201ENSMUST00000197244 68 ntBASIC38.25■■■■□ 3.71
Amigo3Q8C2S7 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC38.23■■■■□ 3.71
Amigo3Q8C2S7 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC38.21■■■■□ 3.71
Amigo3Q8C2S7 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC38.19■■■■□ 3.7
Amigo3Q8C2S7 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC38.18■■■■□ 3.7
Amigo3Q8C2S7 Gm42596-201ENSMUST00000196305 1958 ntBASIC38.18■■■■□ 3.7
Amigo3Q8C2S7 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC38.16■■■■□ 3.7
Amigo3Q8C2S7 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC38.13■■■■□ 3.69
Amigo3Q8C2S7 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC38.12■■■■□ 3.69
Amigo3Q8C2S7 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC38.12■■■■□ 3.69
Amigo3Q8C2S7 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC38.1■■■■□ 3.69
Amigo3Q8C2S7 Gm5987-201ENSMUST00000196433 1151 ntBASIC38.09■■■■□ 3.69
Amigo3Q8C2S7 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC38.05■■■■□ 3.68
Amigo3Q8C2S7 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC38.05■■■■□ 3.68
Amigo3Q8C2S7 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC38.04■■■■□ 3.68
Amigo3Q8C2S7 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC38.04■■■■□ 3.68
Amigo3Q8C2S7 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC38.03■■■■□ 3.68
Amigo3Q8C2S7 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC38.02■■■■□ 3.68
Amigo3Q8C2S7 Gm10524-201ENSMUST00000181931 1893 ntBASIC38.01■■■■□ 3.67
Amigo3Q8C2S7 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC38■■■■□ 3.67
Amigo3Q8C2S7 Gm45855-201ENSMUST00000212546 880 ntBASIC38■■■■□ 3.67
Amigo3Q8C2S7 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC38■■■■□ 3.67
Amigo3Q8C2S7 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC37.96■■■■□ 3.67
Amigo3Q8C2S7 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC37.94■■■■□ 3.66
Amigo3Q8C2S7 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC37.94■■■■□ 3.66
Amigo3Q8C2S7 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC37.93■■■■□ 3.66
Amigo3Q8C2S7 CT025624.2-201ENSMUST00000223609 1909 ntBASIC37.92■■■■□ 3.66
Amigo3Q8C2S7 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC37.9■■■■□ 3.66
Amigo3Q8C2S7 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC37.89■■■■□ 3.66
Amigo3Q8C2S7 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC37.89■■■■□ 3.66
Amigo3Q8C2S7 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC37.89■■■■□ 3.66
Amigo3Q8C2S7 Peli2-204ENSMUST00000226513 1320 ntBASIC37.87■■■■□ 3.65
Amigo3Q8C2S7 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC37.84■■■■□ 3.65
Amigo3Q8C2S7 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC37.82■■■■□ 3.64
Amigo3Q8C2S7 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC37.78■■■■□ 3.64
Amigo3Q8C2S7 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC37.75■■■■□ 3.63
Amigo3Q8C2S7 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC37.75■■■■□ 3.63
Amigo3Q8C2S7 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC37.71■■■■□ 3.63
Amigo3Q8C2S7 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC37.65■■■■□ 3.62
Amigo3Q8C2S7 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC37.64■■■■□ 3.62
Amigo3Q8C2S7 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC37.62■■■■□ 3.61
Amigo3Q8C2S7 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC37.61■■■■□ 3.61
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms