Protein–RNA interactions for Protein: Q8C166

Cpne1, Copine-1, mousemouse

Predictions only

Length 536 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne1Q8C166 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
Cpne1Q8C166 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
Cpne1Q8C166 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Cpne1Q8C166 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
Cpne1Q8C166 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC25.78■■□□□ 1.72
Cpne1Q8C166 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC25.77■■□□□ 1.72
Cpne1Q8C166 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Cpne1Q8C166 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC25.75■■□□□ 1.71
Cpne1Q8C166 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Cpne1Q8C166 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC25.73■■□□□ 1.71
Cpne1Q8C166 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Cpne1Q8C166 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Cpne1Q8C166 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
Cpne1Q8C166 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
Cpne1Q8C166 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
Cpne1Q8C166 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Cpne1Q8C166 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC25.59■■□□□ 1.69
Cpne1Q8C166 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC25.59■■□□□ 1.69
Cpne1Q8C166 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Cpne1Q8C166 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC25.56■■□□□ 1.68
Cpne1Q8C166 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC25.53■■□□□ 1.68
Cpne1Q8C166 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Cpne1Q8C166 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
Cpne1Q8C166 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Cpne1Q8C166 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Cpne1Q8C166 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
Cpne1Q8C166 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC25.35■■□□□ 1.65
Cpne1Q8C166 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Cpne1Q8C166 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Cpne1Q8C166 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC25.33■■□□□ 1.65
Cpne1Q8C166 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Cpne1Q8C166 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Cpne1Q8C166 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC25.28■■□□□ 1.64
Cpne1Q8C166 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC25.26■■□□□ 1.63
Cpne1Q8C166 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC25.25■■□□□ 1.63
Cpne1Q8C166 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Cpne1Q8C166 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC25.24■■□□□ 1.63
Cpne1Q8C166 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC25.21■■□□□ 1.63
Cpne1Q8C166 Zfp131-207ENSMUST00000224946 1783 ntBASIC25.2■■□□□ 1.62
Cpne1Q8C166 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
Cpne1Q8C166 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Cpne1Q8C166 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC25.15■■□□□ 1.62
Cpne1Q8C166 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC25.15■■□□□ 1.62
Cpne1Q8C166 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
Cpne1Q8C166 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC25.12■■□□□ 1.61
Cpne1Q8C166 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Cpne1Q8C166 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Cpne1Q8C166 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Cpne1Q8C166 Gm26115-201ENSMUST00000175605 87 ntBASIC25.05■■□□□ 1.6
Cpne1Q8C166 Gm17082-201ENSMUST00000166043 1091 ntBASIC25.02■■□□□ 1.6
Cpne1Q8C166 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Cpne1Q8C166 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC25.01■■□□□ 1.59
Cpne1Q8C166 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Cpne1Q8C166 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC25■■□□□ 1.59
Cpne1Q8C166 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
Cpne1Q8C166 Gm8109-201ENSMUST00000194076 746 ntBASIC24.98■■□□□ 1.59
Cpne1Q8C166 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
Cpne1Q8C166 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Cpne1Q8C166 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Cpne1Q8C166 AL845457.1-201ENSMUST00000197244 68 ntBASIC24.94■■□□□ 1.58
Cpne1Q8C166 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC24.94■■□□□ 1.58
Cpne1Q8C166 Gm27322-201ENSMUST00000184007 104 ntBASIC24.92■■□□□ 1.58
Cpne1Q8C166 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Cpne1Q8C166 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC24.89■■□□□ 1.58
Cpne1Q8C166 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Cpne1Q8C166 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC24.87■■□□□ 1.57
Cpne1Q8C166 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC24.87■■□□□ 1.57
Cpne1Q8C166 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC24.85■■□□□ 1.57
Cpne1Q8C166 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC24.84■■□□□ 1.57
Cpne1Q8C166 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
Cpne1Q8C166 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Cpne1Q8C166 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Cpne1Q8C166 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
Cpne1Q8C166 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
Cpne1Q8C166 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC24.74■■□□□ 1.55
Cpne1Q8C166 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC24.73■■□□□ 1.55
Cpne1Q8C166 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC24.73■■□□□ 1.55
Cpne1Q8C166 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Cpne1Q8C166 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Cpne1Q8C166 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC24.72■■□□□ 1.55
Cpne1Q8C166 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Cpne1Q8C166 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC24.69■■□□□ 1.54
Cpne1Q8C166 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC24.68■■□□□ 1.54
Cpne1Q8C166 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC24.68■■□□□ 1.54
Cpne1Q8C166 AC166822.3-201ENSMUST00000227394 661 ntBASIC24.64■■□□□ 1.54
Cpne1Q8C166 Mipep-204ENSMUST00000225043 1548 ntBASIC24.61■■□□□ 1.53
Cpne1Q8C166 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC24.61■■□□□ 1.53
Cpne1Q8C166 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
Cpne1Q8C166 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC24.55■■□□□ 1.52
Cpne1Q8C166 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Cpne1Q8C166 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Cpne1Q8C166 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC24.51■■□□□ 1.51
Cpne1Q8C166 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Cpne1Q8C166 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Cpne1Q8C166 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Cpne1Q8C166 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC24.49■■□□□ 1.51
Cpne1Q8C166 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Cpne1Q8C166 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC24.45■■□□□ 1.5
Cpne1Q8C166 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Cpne1Q8C166 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms