Protein–RNA interactions for Protein: Q8BYM7

Rsph4a, Radial spoke head protein 4 homolog A, mousemouse

Predictions only

Length 716 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph4aQ8BYM7 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC41.41■■■■■ 4.22
Rsph4aQ8BYM7 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC41.41■■■■■ 4.22
Rsph4aQ8BYM7 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC41.37■■■■■ 4.21
Rsph4aQ8BYM7 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC41.33■■■■■ 4.21
Rsph4aQ8BYM7 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC41.29■■■■■ 4.2
Rsph4aQ8BYM7 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC41.26■■■■■ 4.2
Rsph4aQ8BYM7 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC41.24■■■■■ 4.19
Rsph4aQ8BYM7 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC41.21■■■■■ 4.19
Rsph4aQ8BYM7 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC41.21■■■■■ 4.19
Rsph4aQ8BYM7 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC41.1■■■■■ 4.17
Rsph4aQ8BYM7 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC41.02■■■■■ 4.16
Rsph4aQ8BYM7 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC41.02■■■■■ 4.16
Rsph4aQ8BYM7 Zfp131-205ENSMUST00000223812 663 ntBASIC41■■■■■ 4.15
Rsph4aQ8BYM7 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC40.99■■■■■ 4.15
Rsph4aQ8BYM7 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC40.91■■■■■ 4.14
Rsph4aQ8BYM7 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC40.91■■■■■ 4.14
Rsph4aQ8BYM7 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC40.88■■■■■ 4.13
Rsph4aQ8BYM7 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC40.86■■■■■ 4.13
Rsph4aQ8BYM7 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC40.86■■■■■ 4.13
Rsph4aQ8BYM7 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC40.83■■■■■ 4.13
Rsph4aQ8BYM7 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC40.81■■■■■ 4.12
Rsph4aQ8BYM7 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC40.8■■■■■ 4.12
Rsph4aQ8BYM7 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC40.77■■■■■ 4.12
Rsph4aQ8BYM7 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC40.75■■■■■ 4.11
Rsph4aQ8BYM7 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC40.7■■■■■ 4.11
Rsph4aQ8BYM7 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC40.68■■■■■ 4.1
Rsph4aQ8BYM7 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC40.67■■■■■ 4.1
Rsph4aQ8BYM7 Gm10524-201ENSMUST00000181931 1893 ntBASIC40.66■■■■■ 4.1
Rsph4aQ8BYM7 CT025624.2-201ENSMUST00000223609 1909 ntBASIC40.62■■■■■ 4.09
Rsph4aQ8BYM7 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC40.62■■■■■ 4.09
Rsph4aQ8BYM7 AC166822.3-201ENSMUST00000227394 661 ntBASIC40.61■■■■■ 4.09
Rsph4aQ8BYM7 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC40.6■■■■■ 4.09
Rsph4aQ8BYM7 Gm42596-201ENSMUST00000196305 1958 ntBASIC40.6■■■■■ 4.09
Rsph4aQ8BYM7 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC40.51■■■■■ 4.08
Rsph4aQ8BYM7 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC40.51■■■■■ 4.07
Rsph4aQ8BYM7 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC40.49■■■■■ 4.07
Rsph4aQ8BYM7 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC40.46■■■■■ 4.07
Rsph4aQ8BYM7 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC40.45■■■■■ 4.07
Rsph4aQ8BYM7 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC40.45■■■■■ 4.07
Rsph4aQ8BYM7 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC40.38■■■■■ 4.05
Rsph4aQ8BYM7 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC40.36■■■■■ 4.05
Rsph4aQ8BYM7 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC40.33■■■■■ 4.05
Rsph4aQ8BYM7 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC40.3■■■■■ 4.04
Rsph4aQ8BYM7 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC40.28■■■■■ 4.04
Rsph4aQ8BYM7 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC40.28■■■■■ 4.04
Rsph4aQ8BYM7 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC40.26■■■■■ 4.04
Rsph4aQ8BYM7 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC40.24■■■■■ 4.03
Rsph4aQ8BYM7 AL845457.1-201ENSMUST00000197244 68 ntBASIC40.22■■■■■ 4.03
Rsph4aQ8BYM7 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC40.21■■■■■ 4.03
Rsph4aQ8BYM7 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC40.2■■■■■ 4.03
Rsph4aQ8BYM7 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC40.19■■■■■ 4.02
Rsph4aQ8BYM7 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC40.19■■■■■ 4.02
Rsph4aQ8BYM7 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC40.16■■■■■ 4.02
Rsph4aQ8BYM7 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC40.12■■■■■ 4.01
Rsph4aQ8BYM7 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC40.09■■■■■ 4.01
Rsph4aQ8BYM7 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC40.08■■■■■ 4.01
Rsph4aQ8BYM7 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC40.07■■■■■ 4
Rsph4aQ8BYM7 Gm16148-201ENSMUST00000119653 893 ntBASIC40.04■■■■■ 4
Rsph4aQ8BYM7 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC40.02■■■■■ 4
Rsph4aQ8BYM7 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC39.99■■■■□ 3.99
Rsph4aQ8BYM7 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC39.98■■■■□ 3.99
Rsph4aQ8BYM7 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC39.97■■■■□ 3.99
Rsph4aQ8BYM7 Tdp2-203ENSMUST00000223804 1136 ntBASIC39.96■■■■□ 3.99
Rsph4aQ8BYM7 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC39.9■■■■□ 3.98
Rsph4aQ8BYM7 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC39.9■■■■□ 3.98
Rsph4aQ8BYM7 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC39.89■■■■□ 3.98
Rsph4aQ8BYM7 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC39.83■■■■□ 3.97
Rsph4aQ8BYM7 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC39.81■■■■□ 3.96
Rsph4aQ8BYM7 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC39.73■■■■□ 3.95
Rsph4aQ8BYM7 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC39.67■■■■□ 3.94
Rsph4aQ8BYM7 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC39.67■■■■□ 3.94
Rsph4aQ8BYM7 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC39.66■■■■□ 3.94
Rsph4aQ8BYM7 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC39.66■■■■□ 3.94
Rsph4aQ8BYM7 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC39.65■■■■□ 3.94
Rsph4aQ8BYM7 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC39.63■■■■□ 3.93
Rsph4aQ8BYM7 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC39.63■■■■□ 3.93
Rsph4aQ8BYM7 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC39.61■■■■□ 3.93
Rsph4aQ8BYM7 Peli2-204ENSMUST00000226513 1320 ntBASIC39.6■■■■□ 3.93
Rsph4aQ8BYM7 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC39.57■■■■□ 3.93
Rsph4aQ8BYM7 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC39.56■■■■□ 3.92
Rsph4aQ8BYM7 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC39.55■■■■□ 3.92
Rsph4aQ8BYM7 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC39.54■■■■□ 3.92
Rsph4aQ8BYM7 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC39.54■■■■□ 3.92
Rsph4aQ8BYM7 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC39.53■■■■□ 3.92
Rsph4aQ8BYM7 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC39.52■■■■□ 3.92
Rsph4aQ8BYM7 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC39.51■■■■□ 3.92
Rsph4aQ8BYM7 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC39.5■■■■□ 3.91
Rsph4aQ8BYM7 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC39.5■■■■□ 3.91
Rsph4aQ8BYM7 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC39.49■■■■□ 3.91
Rsph4aQ8BYM7 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC39.47■■■■□ 3.91
Rsph4aQ8BYM7 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC39.46■■■■□ 3.91
Rsph4aQ8BYM7 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC39.44■■■■□ 3.9
Rsph4aQ8BYM7 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC39.44■■■■□ 3.9
Rsph4aQ8BYM7 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC39.41■■■■□ 3.9
Rsph4aQ8BYM7 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC39.39■■■■□ 3.9
Rsph4aQ8BYM7 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC39.38■■■■□ 3.89
Rsph4aQ8BYM7 Zfp131-207ENSMUST00000224946 1783 ntBASIC39.28■■■■□ 3.88
Rsph4aQ8BYM7 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC39.26■■■■□ 3.88
Rsph4aQ8BYM7 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC39.26■■■■□ 3.88
Rsph4aQ8BYM7 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC39.25■■■■□ 3.87
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms