Protein–RNA interactions for Protein: Q8BV57

Ssc5d, Soluble scavenger receptor cysteine-rich domain-containing protein SSC5D, mousemouse

Predictions only

Length 1,371 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssc5dQ8BV57 Gm42596-201ENSMUST00000196305 1958 ntBASIC35,47■■■■□ 3,27
Ssc5dQ8BV57 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC35,45■■■■□ 3,27
Ssc5dQ8BV57 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC35,45■■■■□ 3,27
Ssc5dQ8BV57 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC35,37■■■■□ 3,25
Ssc5dQ8BV57 CT025624.2-201ENSMUST00000223609 1909 ntBASIC35,36■■■■□ 3,25
Ssc5dQ8BV57 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC35,33■■■■□ 3,25
Ssc5dQ8BV57 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC35,29■■■■□ 3,24
Ssc5dQ8BV57 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC35,26■■■■□ 3,24
Ssc5dQ8BV57 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC35,14■■■■□ 3,22
Ssc5dQ8BV57 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC35,12■■■■□ 3,21
Ssc5dQ8BV57 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC35,11■■■■□ 3,21
Ssc5dQ8BV57 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC35,09■■■■□ 3,21
Ssc5dQ8BV57 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC35,09■■■■□ 3,21
Ssc5dQ8BV57 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC35,04■■■■□ 3,2
Ssc5dQ8BV57 Gm27322-201ENSMUST00000184007 104 ntBASIC35,03■■■■□ 3,2
Ssc5dQ8BV57 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC35■■■■□ 3,19
Ssc5dQ8BV57 Gm24804-201ENSMUST00000174982 85 ntBASIC34,93■■■■□ 3,18
Ssc5dQ8BV57 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC34,87■■■■□ 3,17
Ssc5dQ8BV57 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC34,85■■■■□ 3,17
Ssc5dQ8BV57 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC34,83■■■■□ 3,17
Ssc5dQ8BV57 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC34,82■■■■□ 3,17
Ssc5dQ8BV57 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC34,8■■■■□ 3,16
Ssc5dQ8BV57 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC34,77■■■■□ 3,16
Ssc5dQ8BV57 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC34,76■■■■□ 3,16
Ssc5dQ8BV57 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC34,74■■■■□ 3,15
Ssc5dQ8BV57 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC34,74■■■■□ 3,15
Ssc5dQ8BV57 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC34,61■■■■□ 3,13
Ssc5dQ8BV57 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC34,61■■■■□ 3,13
Ssc5dQ8BV57 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC34,59■■■■□ 3,13
Ssc5dQ8BV57 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC34,56■■■■□ 3,12
Ssc5dQ8BV57 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC34,54■■■■□ 3,12
Ssc5dQ8BV57 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC34,52■■■■□ 3,12
Ssc5dQ8BV57 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC34,49■■■■□ 3,11
Ssc5dQ8BV57 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC34,49■■■■□ 3,11
Ssc5dQ8BV57 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC34,47■■■■□ 3,11
Ssc5dQ8BV57 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC34,45■■■■□ 3,11
Ssc5dQ8BV57 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC34,42■■■■□ 3,1
Ssc5dQ8BV57 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC34,42■■■■□ 3,1
Ssc5dQ8BV57 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC34,41■■■■□ 3,1
Ssc5dQ8BV57 AL845457.1-201ENSMUST00000197244 68 ntBASIC34,41■■■■□ 3,1
Ssc5dQ8BV57 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC34,4■■■■□ 3,1
Ssc5dQ8BV57 AC166822.3-201ENSMUST00000227394 661 ntBASIC34,4■■■■□ 3,1
Ssc5dQ8BV57 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC34,39■■■■□ 3,1
Ssc5dQ8BV57 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC34,36■■■■□ 3,09
Ssc5dQ8BV57 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC34,34■■■■□ 3,09
Ssc5dQ8BV57 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC34,29■■■■□ 3,08
Ssc5dQ8BV57 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC34,28■■■■□ 3,08
Ssc5dQ8BV57 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC34,27■■■■□ 3,08
Ssc5dQ8BV57 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC34,26■■■■□ 3,08
Ssc5dQ8BV57 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC34,26■■■■□ 3,07
Ssc5dQ8BV57 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC34,24■■■■□ 3,07
Ssc5dQ8BV57 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC34,17■■■■□ 3,06
Ssc5dQ8BV57 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC34,15■■■■□ 3,06
Ssc5dQ8BV57 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC34,12■■■■□ 3,05
Ssc5dQ8BV57 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC34,12■■■■□ 3,05
Ssc5dQ8BV57 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC34,11■■■■□ 3,05
Ssc5dQ8BV57 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC34,09■■■■□ 3,05
Ssc5dQ8BV57 Zfp131-207ENSMUST00000224946 1783 ntBASIC34,08■■■■□ 3,05
Ssc5dQ8BV57 Zfp131-205ENSMUST00000223812 663 ntBASIC34,08■■■■□ 3,05
Ssc5dQ8BV57 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC34,02■■■■□ 3,04
Ssc5dQ8BV57 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC34,01■■■■□ 3,04
Ssc5dQ8BV57 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC34,01■■■■□ 3,04
Ssc5dQ8BV57 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC34,01■■■■□ 3,03
Ssc5dQ8BV57 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC34■■■■□ 3,03
Ssc5dQ8BV57 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC33,99■■■■□ 3,03
Ssc5dQ8BV57 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC33,97■■■■□ 3,03
Ssc5dQ8BV57 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC33,91■■■■□ 3,02
Ssc5dQ8BV57 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC33,83■■■■□ 3,01
Ssc5dQ8BV57 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC33,76■■■■□ 3
Ssc5dQ8BV57 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC33,75■■■□□ 2,99
Ssc5dQ8BV57 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC33,75■■■□□ 2,99
Ssc5dQ8BV57 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC33,75■■■□□ 2,99
Ssc5dQ8BV57 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC33,74■■■□□ 2,99
Ssc5dQ8BV57 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC33,72■■■□□ 2,99
Ssc5dQ8BV57 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC33,71■■■□□ 2,99
Ssc5dQ8BV57 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC33,7■■■□□ 2,99
Ssc5dQ8BV57 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC33,68■■■□□ 2,98
Ssc5dQ8BV57 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC33,66■■■□□ 2,98
Ssc5dQ8BV57 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC33,65■■■□□ 2,98
Ssc5dQ8BV57 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC33,62■■■□□ 2,97
Ssc5dQ8BV57 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC33,6■■■□□ 2,97
Ssc5dQ8BV57 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC33,59■■■□□ 2,97
Ssc5dQ8BV57 Peli2-204ENSMUST00000226513 1320 ntBASIC33,59■■■□□ 2,97
Ssc5dQ8BV57 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC33,57■■■□□ 2,96
Ssc5dQ8BV57 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC33,56■■■□□ 2,96
Ssc5dQ8BV57 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC33,56■■■□□ 2,96
Ssc5dQ8BV57 Gm16148-201ENSMUST00000119653 893 ntBASIC33,53■■■□□ 2,96
Ssc5dQ8BV57 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC33,53■■■□□ 2,96
Ssc5dQ8BV57 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC33,52■■■□□ 2,96
Ssc5dQ8BV57 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC33,51■■■□□ 2,96
Ssc5dQ8BV57 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC33,5■■■□□ 2,95
Ssc5dQ8BV57 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC33,49■■■□□ 2,95
Ssc5dQ8BV57 Mipep-204ENSMUST00000225043 1548 ntBASIC33,49■■■□□ 2,95
Ssc5dQ8BV57 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC33,48■■■□□ 2,95
Ssc5dQ8BV57 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC33,48■■■□□ 2,95
Ssc5dQ8BV57 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC33,44■■■□□ 2,94
Ssc5dQ8BV57 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC33,43■■■□□ 2,94
Ssc5dQ8BV57 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC33,43■■■□□ 2,94
Ssc5dQ8BV57 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC33,42■■■□□ 2,94
Ssc5dQ8BV57 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC33,42■■■□□ 2,94
Retrieved 100 of 76,532 protein–RNA pairs in 8,2 ms