Protein–RNA interactions for Protein: Q8BTV2

Cpsf7, Cleavage and polyadenylation specificity factor subunit 7, mousemouse

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf7Q8BTV2 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC27.58■■■□□ 2.01
Cpsf7Q8BTV2 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC27.54■■■□□ 2
Cpsf7Q8BTV2 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■■□□ 2
Cpsf7Q8BTV2 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC27.49■■□□□ 1.99
Cpsf7Q8BTV2 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Cpsf7Q8BTV2 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC27.44■■□□□ 1.98
Cpsf7Q8BTV2 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC27.43■■□□□ 1.98
Cpsf7Q8BTV2 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Cpsf7Q8BTV2 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Cpsf7Q8BTV2 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Cpsf7Q8BTV2 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Cpsf7Q8BTV2 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC27.37■■□□□ 1.97
Cpsf7Q8BTV2 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Cpsf7Q8BTV2 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Cpsf7Q8BTV2 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC27.3■■□□□ 1.96
Cpsf7Q8BTV2 Gm25238-201ENSMUST00000174914 89 ntBASIC27.28■■□□□ 1.96
Cpsf7Q8BTV2 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC27.26■■□□□ 1.95
Cpsf7Q8BTV2 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Cpsf7Q8BTV2 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Cpsf7Q8BTV2 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC27.23■■□□□ 1.95
Cpsf7Q8BTV2 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Cpsf7Q8BTV2 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC27.2■■□□□ 1.94
Cpsf7Q8BTV2 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
Cpsf7Q8BTV2 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC27.18■■□□□ 1.94
Cpsf7Q8BTV2 Gm27325-201ENSMUST00000175467 74 ntBASIC27.17■■□□□ 1.94
Cpsf7Q8BTV2 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC27.15■■□□□ 1.94
Cpsf7Q8BTV2 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Cpsf7Q8BTV2 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC27.13■■□□□ 1.93
Cpsf7Q8BTV2 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Cpsf7Q8BTV2 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Cpsf7Q8BTV2 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Cpsf7Q8BTV2 Gm2415-204ENSMUST00000190235 2004 ntBASIC26.94■■□□□ 1.9
Cpsf7Q8BTV2 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Cpsf7Q8BTV2 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Cpsf7Q8BTV2 AC153504.1-201ENSMUST00000218379 2290 ntBASIC26.89■■□□□ 1.9
Cpsf7Q8BTV2 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Cpsf7Q8BTV2 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC26.87■■□□□ 1.89
Cpsf7Q8BTV2 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Cpsf7Q8BTV2 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Cpsf7Q8BTV2 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC26.82■■□□□ 1.88
Cpsf7Q8BTV2 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC26.8■■□□□ 1.88
Cpsf7Q8BTV2 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
Cpsf7Q8BTV2 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Cpsf7Q8BTV2 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Cpsf7Q8BTV2 Zfp131-207ENSMUST00000224946 1783 ntBASIC26.78■■□□□ 1.88
Cpsf7Q8BTV2 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC26.77■■□□□ 1.88
Cpsf7Q8BTV2 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC26.74■■□□□ 1.87
Cpsf7Q8BTV2 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
Cpsf7Q8BTV2 Gm6658-202ENSMUST00000209493 1885 ntBASIC26.72■■□□□ 1.87
Cpsf7Q8BTV2 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Cpsf7Q8BTV2 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
Cpsf7Q8BTV2 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC26.69■■□□□ 1.86
Cpsf7Q8BTV2 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC26.68■■□□□ 1.86
Cpsf7Q8BTV2 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Cpsf7Q8BTV2 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Cpsf7Q8BTV2 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Cpsf7Q8BTV2 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
Cpsf7Q8BTV2 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
Cpsf7Q8BTV2 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
Cpsf7Q8BTV2 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
Cpsf7Q8BTV2 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
Cpsf7Q8BTV2 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC26.58■■□□□ 1.85
Cpsf7Q8BTV2 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Cpsf7Q8BTV2 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Cpsf7Q8BTV2 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Cpsf7Q8BTV2 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
Cpsf7Q8BTV2 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC26.52■■□□□ 1.84
Cpsf7Q8BTV2 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC26.49■■□□□ 1.83
Cpsf7Q8BTV2 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Cpsf7Q8BTV2 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Cpsf7Q8BTV2 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Cpsf7Q8BTV2 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC26.43■■□□□ 1.82
Cpsf7Q8BTV2 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC26.42■■□□□ 1.82
Cpsf7Q8BTV2 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC26.42■■□□□ 1.82
Cpsf7Q8BTV2 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Cpsf7Q8BTV2 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
Cpsf7Q8BTV2 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Cpsf7Q8BTV2 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Cpsf7Q8BTV2 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC26.36■■□□□ 1.81
Cpsf7Q8BTV2 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
Cpsf7Q8BTV2 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC26.35■■□□□ 1.81
Cpsf7Q8BTV2 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Cpsf7Q8BTV2 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Cpsf7Q8BTV2 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC26.33■■□□□ 1.81
Cpsf7Q8BTV2 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
Cpsf7Q8BTV2 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Cpsf7Q8BTV2 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Cpsf7Q8BTV2 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
Cpsf7Q8BTV2 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC26.3■■□□□ 1.8
Cpsf7Q8BTV2 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Cpsf7Q8BTV2 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
Cpsf7Q8BTV2 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
Cpsf7Q8BTV2 Gm9905-201ENSMUST00000065740 1845 ntBASIC26.25■■□□□ 1.79
Cpsf7Q8BTV2 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Cpsf7Q8BTV2 Gm6206-201ENSMUST00000133472 2199 ntBASIC26.2■■□□□ 1.78
Cpsf7Q8BTV2 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Cpsf7Q8BTV2 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Cpsf7Q8BTV2 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Cpsf7Q8BTV2 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC26.14■■□□□ 1.78
Cpsf7Q8BTV2 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC26.13■■□□□ 1.77
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms