Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC26.41■■□□□ 1.82
Cpne3Q8BT60 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC26.37■■□□□ 1.81
Cpne3Q8BT60 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC26.37■■□□□ 1.81
Cpne3Q8BT60 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC26.35■■□□□ 1.81
Cpne3Q8BT60 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Cpne3Q8BT60 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Cpne3Q8BT60 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC26.25■■□□□ 1.79
Cpne3Q8BT60 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC26.22■■□□□ 1.79
Cpne3Q8BT60 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC26.19■■□□□ 1.78
Cpne3Q8BT60 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC26.16■■□□□ 1.78
Cpne3Q8BT60 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Cpne3Q8BT60 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC26.11■■□□□ 1.77
Cpne3Q8BT60 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC26.08■■□□□ 1.77
Cpne3Q8BT60 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
Cpne3Q8BT60 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Cpne3Q8BT60 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Cpne3Q8BT60 Rab21-202ENSMUST00000218831 843 ntBASIC26■■□□□ 1.75
Cpne3Q8BT60 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
Cpne3Q8BT60 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC25.94■■□□□ 1.74
Cpne3Q8BT60 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Cpne3Q8BT60 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Cpne3Q8BT60 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
Cpne3Q8BT60 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Cpne3Q8BT60 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Cpne3Q8BT60 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
Cpne3Q8BT60 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC25.88■■□□□ 1.73
Cpne3Q8BT60 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC25.87■■□□□ 1.73
Cpne3Q8BT60 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
Cpne3Q8BT60 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC25.85■■□□□ 1.73
Cpne3Q8BT60 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC25.84■■□□□ 1.73
Cpne3Q8BT60 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Cpne3Q8BT60 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC25.81■■□□□ 1.72
Cpne3Q8BT60 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC25.77■■□□□ 1.72
Cpne3Q8BT60 Zfp131-207ENSMUST00000224946 1783 ntBASIC25.77■■□□□ 1.72
Cpne3Q8BT60 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC25.76■■□□□ 1.71
Cpne3Q8BT60 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC25.75■■□□□ 1.71
Cpne3Q8BT60 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC25.74■■□□□ 1.71
Cpne3Q8BT60 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Cpne3Q8BT60 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC25.73■■□□□ 1.71
Cpne3Q8BT60 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Cpne3Q8BT60 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC25.71■■□□□ 1.71
Cpne3Q8BT60 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
Cpne3Q8BT60 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Cpne3Q8BT60 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC25.66■■□□□ 1.7
Cpne3Q8BT60 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
Cpne3Q8BT60 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC25.66■■□□□ 1.7
Cpne3Q8BT60 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC25.64■■□□□ 1.69
Cpne3Q8BT60 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Cpne3Q8BT60 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC25.62■■□□□ 1.69
Cpne3Q8BT60 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
Cpne3Q8BT60 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC25.57■■□□□ 1.68
Cpne3Q8BT60 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
Cpne3Q8BT60 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC25.53■■□□□ 1.68
Cpne3Q8BT60 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Cpne3Q8BT60 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Cpne3Q8BT60 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Cpne3Q8BT60 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
Cpne3Q8BT60 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Cpne3Q8BT60 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
Cpne3Q8BT60 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC25.46■■□□□ 1.67
Cpne3Q8BT60 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC25.45■■□□□ 1.67
Cpne3Q8BT60 Gm25262-201ENSMUST00000174934 133 ntBASIC25.42■■□□□ 1.66
Cpne3Q8BT60 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Cpne3Q8BT60 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC25.4■■□□□ 1.66
Cpne3Q8BT60 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Cpne3Q8BT60 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC25.34■■□□□ 1.65
Cpne3Q8BT60 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Cpne3Q8BT60 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Cpne3Q8BT60 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Cpne3Q8BT60 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC25.32■■□□□ 1.64
Cpne3Q8BT60 Gm2415-204ENSMUST00000190235 2004 ntBASIC25.27■■□□□ 1.64
Cpne3Q8BT60 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Cpne3Q8BT60 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
Cpne3Q8BT60 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
Cpne3Q8BT60 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Cpne3Q8BT60 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
Cpne3Q8BT60 AL845457.1-201ENSMUST00000197244 68 ntBASIC25.21■■□□□ 1.63
Cpne3Q8BT60 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC25.2■■□□□ 1.63
Cpne3Q8BT60 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.62
Cpne3Q8BT60 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC25.17■■□□□ 1.62
Cpne3Q8BT60 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC25.17■■□□□ 1.62
Cpne3Q8BT60 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC25.17■■□□□ 1.62
Cpne3Q8BT60 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC25.14■■□□□ 1.62
Cpne3Q8BT60 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Cpne3Q8BT60 Gm6658-202ENSMUST00000209493 1885 ntBASIC25.11■■□□□ 1.61
Cpne3Q8BT60 Mipep-204ENSMUST00000225043 1548 ntBASIC25.07■■□□□ 1.6
Cpne3Q8BT60 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC25.06■■□□□ 1.6
Cpne3Q8BT60 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Cpne3Q8BT60 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Cpne3Q8BT60 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC25.04■■□□□ 1.6
Cpne3Q8BT60 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Cpne3Q8BT60 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC25.02■■□□□ 1.6
Cpne3Q8BT60 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC25.02■■□□□ 1.6
Cpne3Q8BT60 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
Cpne3Q8BT60 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Cpne3Q8BT60 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
Cpne3Q8BT60 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC24.97■■□□□ 1.59
Cpne3Q8BT60 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC24.93■■□□□ 1.58
Cpne3Q8BT60 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Cpne3Q8BT60 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms