Protein–RNA interactions for Protein: Q8BLY3

Lrfn3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, mousemouse

Predictions only

Length 626 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrfn3Q8BLY3 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC28,23■■■□□ 2,11
Lrfn3Q8BLY3 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC28,22■■■□□ 2,11
Lrfn3Q8BLY3 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC28,14■■■□□ 2,1
Lrfn3Q8BLY3 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC28,14■■■□□ 2,1
Lrfn3Q8BLY3 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC28,13■■■□□ 2,09
Lrfn3Q8BLY3 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC28,11■■■□□ 2,09
Lrfn3Q8BLY3 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC28,04■■■□□ 2,08
Lrfn3Q8BLY3 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC27,98■■■□□ 2,07
Lrfn3Q8BLY3 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC27,97■■■□□ 2,07
Lrfn3Q8BLY3 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC27,96■■■□□ 2,07
Lrfn3Q8BLY3 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC27,96■■■□□ 2,07
Lrfn3Q8BLY3 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC27,95■■■□□ 2,06
Lrfn3Q8BLY3 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC27,89■■■□□ 2,06
Lrfn3Q8BLY3 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC27,87■■■□□ 2,05
Lrfn3Q8BLY3 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC27,86■■■□□ 2,05
Lrfn3Q8BLY3 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC27,85■■■□□ 2,05
Lrfn3Q8BLY3 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC27,81■■■□□ 2,04
Lrfn3Q8BLY3 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC27,81■■■□□ 2,04
Lrfn3Q8BLY3 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC27,78■■■□□ 2,04
Lrfn3Q8BLY3 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC27,75■■■□□ 2,03
Lrfn3Q8BLY3 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC27,71■■■□□ 2,03
Lrfn3Q8BLY3 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC27,71■■■□□ 2,03
Lrfn3Q8BLY3 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC27,7■■■□□ 2,02
Lrfn3Q8BLY3 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC27,69■■■□□ 2,02
Lrfn3Q8BLY3 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC27,68■■■□□ 2,02
Lrfn3Q8BLY3 Tdp2-203ENSMUST00000223804 1136 ntBASIC27,66■■■□□ 2,02
Lrfn3Q8BLY3 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC27,66■■■□□ 2,02
Lrfn3Q8BLY3 Gm5987-201ENSMUST00000196433 1151 ntBASIC27,65■■■□□ 2,02
Lrfn3Q8BLY3 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC27,64■■■□□ 2,02
Lrfn3Q8BLY3 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC27,63■■■□□ 2,01
Lrfn3Q8BLY3 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC27,62■■■□□ 2,01
Lrfn3Q8BLY3 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC27,57■■■□□ 2
Lrfn3Q8BLY3 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC27,57■■■□□ 2
Lrfn3Q8BLY3 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC27,56■■■□□ 2
Lrfn3Q8BLY3 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC27,51■■□□□ 1,99
Lrfn3Q8BLY3 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC27,5■■□□□ 1,99
Lrfn3Q8BLY3 AC166822.3-201ENSMUST00000227394 661 ntBASIC27,48■■□□□ 1,99
Lrfn3Q8BLY3 Gm16148-201ENSMUST00000119653 893 ntBASIC27,46■■□□□ 1,99
Lrfn3Q8BLY3 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC27,45■■□□□ 1,98
Lrfn3Q8BLY3 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC27,43■■□□□ 1,98
Lrfn3Q8BLY3 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC27,42■■□□□ 1,98
Lrfn3Q8BLY3 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC27,39■■□□□ 1,97
Lrfn3Q8BLY3 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC27,36■■□□□ 1,97
Lrfn3Q8BLY3 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC27,35■■□□□ 1,97
Lrfn3Q8BLY3 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC27,35■■□□□ 1,97
Lrfn3Q8BLY3 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC27,32■■□□□ 1,96
Lrfn3Q8BLY3 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC27,32■■□□□ 1,96
Lrfn3Q8BLY3 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC27,3■■□□□ 1,96
Lrfn3Q8BLY3 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC27,28■■□□□ 1,96
Lrfn3Q8BLY3 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC27,28■■□□□ 1,96
Lrfn3Q8BLY3 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC27,27■■□□□ 1,96
Lrfn3Q8BLY3 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC27,26■■□□□ 1,95
Lrfn3Q8BLY3 Gm45855-201ENSMUST00000212546 880 ntBASIC27,26■■□□□ 1,95
Lrfn3Q8BLY3 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC27,26■■□□□ 1,95
Lrfn3Q8BLY3 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC27,25■■□□□ 1,95
Lrfn3Q8BLY3 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC27,23■■□□□ 1,95
Lrfn3Q8BLY3 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC27,22■■□□□ 1,95
Lrfn3Q8BLY3 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC27,22■■□□□ 1,95
Lrfn3Q8BLY3 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC27,18■■□□□ 1,94
Lrfn3Q8BLY3 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC27,18■■□□□ 1,94
Lrfn3Q8BLY3 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC27,18■■□□□ 1,94
Lrfn3Q8BLY3 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC27,16■■□□□ 1,94
Lrfn3Q8BLY3 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC27,14■■□□□ 1,94
Lrfn3Q8BLY3 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC27,13■■□□□ 1,93
Lrfn3Q8BLY3 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC27,1■■□□□ 1,93
Lrfn3Q8BLY3 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC27,1■■□□□ 1,93
Lrfn3Q8BLY3 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC27,09■■□□□ 1,93
Lrfn3Q8BLY3 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC27,07■■□□□ 1,92
Lrfn3Q8BLY3 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC27,06■■□□□ 1,92
Lrfn3Q8BLY3 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC27,06■■□□□ 1,92
Lrfn3Q8BLY3 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC27,05■■□□□ 1,92
Lrfn3Q8BLY3 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC27,05■■□□□ 1,92
Lrfn3Q8BLY3 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC27,03■■□□□ 1,92
Lrfn3Q8BLY3 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC27,02■■□□□ 1,92
Lrfn3Q8BLY3 Psd-208ENSMUST00000224556 2034 ntBASIC26,99■■□□□ 1,91
Lrfn3Q8BLY3 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC26,99■■□□□ 1,91
Lrfn3Q8BLY3 AL845457.1-201ENSMUST00000197244 68 ntBASIC26,98■■□□□ 1,91
Lrfn3Q8BLY3 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC26,96■■□□□ 1,91
Lrfn3Q8BLY3 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC26,94■■□□□ 1,9
Lrfn3Q8BLY3 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC26,93■■□□□ 1,9
Lrfn3Q8BLY3 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC26,92■■□□□ 1,9
Lrfn3Q8BLY3 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC26,91■■□□□ 1,9
Lrfn3Q8BLY3 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC26,9■■□□□ 1,9
Lrfn3Q8BLY3 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC26,89■■□□□ 1,89
Lrfn3Q8BLY3 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC26,88■■□□□ 1,89
Lrfn3Q8BLY3 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC26,86■■□□□ 1,89
Lrfn3Q8BLY3 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC26,85■■□□□ 1,89
Lrfn3Q8BLY3 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC26,85■■□□□ 1,89
Lrfn3Q8BLY3 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC26,84■■□□□ 1,89
Lrfn3Q8BLY3 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC26,84■■□□□ 1,89
Lrfn3Q8BLY3 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC26,83■■□□□ 1,89
Lrfn3Q8BLY3 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC26,81■■□□□ 1,88
Lrfn3Q8BLY3 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC26,81■■□□□ 1,88
Lrfn3Q8BLY3 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC26,81■■□□□ 1,88
Lrfn3Q8BLY3 Peli2-204ENSMUST00000226513 1320 ntBASIC26,8■■□□□ 1,88
Lrfn3Q8BLY3 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC26,79■■□□□ 1,88
Lrfn3Q8BLY3 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC26,79■■□□□ 1,88
Lrfn3Q8BLY3 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC26,77■■□□□ 1,88
Lrfn3Q8BLY3 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC26,77■■□□□ 1,88
Lrfn3Q8BLY3 Gm9397-201ENSMUST00000200125 605 ntBASIC26,76■■□□□ 1,87
Retrieved 100 of 76,532 protein–RNA pairs in 25,5 ms