Protein–RNA interactions for Protein: Q8BIQ5

Cstf2, Cleavage stimulation factor subunit 2, mousemouse

Known RBP Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf2Q8BIQ5 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.96
Cstf2Q8BIQ5 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Cstf2Q8BIQ5 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Cstf2Q8BIQ5 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC27.23■■□□□ 1.95
Cstf2Q8BIQ5 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Cstf2Q8BIQ5 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Cstf2Q8BIQ5 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC27.17■■□□□ 1.94
Cstf2Q8BIQ5 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Cstf2Q8BIQ5 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC27.11■■□□□ 1.93
Cstf2Q8BIQ5 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Cstf2Q8BIQ5 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Cstf2Q8BIQ5 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC27.08■■□□□ 1.93
Cstf2Q8BIQ5 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
Cstf2Q8BIQ5 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Cstf2Q8BIQ5 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
Cstf2Q8BIQ5 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC27.01■■□□□ 1.91
Cstf2Q8BIQ5 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC27■■□□□ 1.91
Cstf2Q8BIQ5 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC26.98■■□□□ 1.91
Cstf2Q8BIQ5 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC26.97■■□□□ 1.91
Cstf2Q8BIQ5 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC26.94■■□□□ 1.9
Cstf2Q8BIQ5 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Cstf2Q8BIQ5 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Cstf2Q8BIQ5 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
Cstf2Q8BIQ5 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC26.85■■□□□ 1.89
Cstf2Q8BIQ5 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Cstf2Q8BIQ5 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC26.8■■□□□ 1.88
Cstf2Q8BIQ5 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC26.76■■□□□ 1.87
Cstf2Q8BIQ5 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
Cstf2Q8BIQ5 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC26.73■■□□□ 1.87
Cstf2Q8BIQ5 Gm42596-201ENSMUST00000196305 1958 ntBASIC26.71■■□□□ 1.87
Cstf2Q8BIQ5 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
Cstf2Q8BIQ5 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC26.67■■□□□ 1.86
Cstf2Q8BIQ5 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC26.66■■□□□ 1.86
Cstf2Q8BIQ5 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Cstf2Q8BIQ5 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Cstf2Q8BIQ5 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC26.64■■□□□ 1.86
Cstf2Q8BIQ5 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
Cstf2Q8BIQ5 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
Cstf2Q8BIQ5 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC26.61■■□□□ 1.85
Cstf2Q8BIQ5 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC26.59■■□□□ 1.85
Cstf2Q8BIQ5 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Cstf2Q8BIQ5 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
Cstf2Q8BIQ5 Gm10524-201ENSMUST00000181931 1893 ntBASIC26.55■■□□□ 1.84
Cstf2Q8BIQ5 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Cstf2Q8BIQ5 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Cstf2Q8BIQ5 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Cstf2Q8BIQ5 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC26.47■■□□□ 1.83
Cstf2Q8BIQ5 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC26.47■■□□□ 1.83
Cstf2Q8BIQ5 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
Cstf2Q8BIQ5 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC26.45■■□□□ 1.82
Cstf2Q8BIQ5 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC26.41■■□□□ 1.82
Cstf2Q8BIQ5 Tdp2-203ENSMUST00000223804 1136 ntBASIC26.38■■□□□ 1.81
Cstf2Q8BIQ5 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
Cstf2Q8BIQ5 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC26.35■■□□□ 1.81
Cstf2Q8BIQ5 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Cstf2Q8BIQ5 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC26.33■■□□□ 1.81
Cstf2Q8BIQ5 AC166822.3-201ENSMUST00000227394 661 ntBASIC26.33■■□□□ 1.81
Cstf2Q8BIQ5 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Cstf2Q8BIQ5 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
Cstf2Q8BIQ5 Gm16148-201ENSMUST00000119653 893 ntBASIC26.3■■□□□ 1.8
Cstf2Q8BIQ5 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
Cstf2Q8BIQ5 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Cstf2Q8BIQ5 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Cstf2Q8BIQ5 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Cstf2Q8BIQ5 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Cstf2Q8BIQ5 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC26.25■■□□□ 1.79
Cstf2Q8BIQ5 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Cstf2Q8BIQ5 Gm5987-201ENSMUST00000196433 1151 ntBASIC26.24■■□□□ 1.79
Cstf2Q8BIQ5 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC26.18■■□□□ 1.78
Cstf2Q8BIQ5 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC26.18■■□□□ 1.78
Cstf2Q8BIQ5 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Cstf2Q8BIQ5 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC26.14■■□□□ 1.78
Cstf2Q8BIQ5 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Cstf2Q8BIQ5 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC26.14■■□□□ 1.77
Cstf2Q8BIQ5 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
Cstf2Q8BIQ5 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC26.13■■□□□ 1.77
Cstf2Q8BIQ5 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC26.13■■□□□ 1.77
Cstf2Q8BIQ5 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC26.11■■□□□ 1.77
Cstf2Q8BIQ5 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC26.11■■□□□ 1.77
Cstf2Q8BIQ5 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Cstf2Q8BIQ5 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC26.1■■□□□ 1.77
Cstf2Q8BIQ5 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
Cstf2Q8BIQ5 Gm45855-201ENSMUST00000212546 880 ntBASIC26.05■■□□□ 1.76
Cstf2Q8BIQ5 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC26.05■■□□□ 1.76
Cstf2Q8BIQ5 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Cstf2Q8BIQ5 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
Cstf2Q8BIQ5 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC26.01■■□□□ 1.75
Cstf2Q8BIQ5 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC26■■□□□ 1.75
Cstf2Q8BIQ5 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Cstf2Q8BIQ5 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC25.99■■□□□ 1.75
Cstf2Q8BIQ5 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC25.98■■□□□ 1.75
Cstf2Q8BIQ5 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC25.98■■□□□ 1.75
Cstf2Q8BIQ5 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC25.96■■□□□ 1.75
Cstf2Q8BIQ5 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.74
Cstf2Q8BIQ5 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC25.93■■□□□ 1.74
Cstf2Q8BIQ5 AL845457.1-201ENSMUST00000197244 68 ntBASIC25.93■■□□□ 1.74
Cstf2Q8BIQ5 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC25.91■■□□□ 1.74
Cstf2Q8BIQ5 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Cstf2Q8BIQ5 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Cstf2Q8BIQ5 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC25.88■■□□□ 1.73
Retrieved 100 of 76,532 protein–RNA pairs in 9.1 ms