Protein–RNA interactions for Protein: Q811I0

Atpaf1, ATP synthase mitochondrial F1 complex assembly factor 1, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atpaf1Q811I0 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC22.35■■□□□ 1.17
Atpaf1Q811I0 AC153504.1-201ENSMUST00000218379 2290 ntBASIC22.33■■□□□ 1.17
Atpaf1Q811I0 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Atpaf1Q811I0 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Atpaf1Q811I0 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Atpaf1Q811I0 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
Atpaf1Q811I0 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
Atpaf1Q811I0 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Atpaf1Q811I0 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Atpaf1Q811I0 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Atpaf1Q811I0 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Atpaf1Q811I0 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Atpaf1Q811I0 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Atpaf1Q811I0 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Atpaf1Q811I0 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Atpaf1Q811I0 Gm2415-204ENSMUST00000190235 2004 ntBASIC22.05■■□□□ 1.12
Atpaf1Q811I0 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Atpaf1Q811I0 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC22.01■■□□□ 1.11
Atpaf1Q811I0 Zxda-201ENSMUST00000117281 2621 ntBASIC22.01■■□□□ 1.11
Atpaf1Q811I0 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC22■■□□□ 1.11
Atpaf1Q811I0 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC22■■□□□ 1.11
Atpaf1Q811I0 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Atpaf1Q811I0 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Atpaf1Q811I0 Gm23366-201ENSMUST00000175022 89 ntBASIC21.97■■□□□ 1.11
Atpaf1Q811I0 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
Atpaf1Q811I0 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Atpaf1Q811I0 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.11
Atpaf1Q811I0 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Atpaf1Q811I0 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Atpaf1Q811I0 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Atpaf1Q811I0 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Atpaf1Q811I0 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Atpaf1Q811I0 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Atpaf1Q811I0 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Atpaf1Q811I0 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
Atpaf1Q811I0 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Atpaf1Q811I0 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Atpaf1Q811I0 Gm9905-201ENSMUST00000065740 1845 ntBASIC21.81■■□□□ 1.08
Atpaf1Q811I0 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Atpaf1Q811I0 Gm6658-202ENSMUST00000209493 1885 ntBASIC21.78■■□□□ 1.08
Atpaf1Q811I0 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Atpaf1Q811I0 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Atpaf1Q811I0 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC21.77■■□□□ 1.08
Atpaf1Q811I0 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC21.77■■□□□ 1.08
Atpaf1Q811I0 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Atpaf1Q811I0 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Atpaf1Q811I0 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Atpaf1Q811I0 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC21.73■■□□□ 1.07
Atpaf1Q811I0 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Atpaf1Q811I0 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Atpaf1Q811I0 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Atpaf1Q811I0 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Atpaf1Q811I0 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
Atpaf1Q811I0 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC21.7■■□□□ 1.06
Atpaf1Q811I0 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Atpaf1Q811I0 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Atpaf1Q811I0 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Atpaf1Q811I0 Gm6206-201ENSMUST00000133472 2199 ntBASIC21.67■■□□□ 1.06
Atpaf1Q811I0 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Atpaf1Q811I0 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Atpaf1Q811I0 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Atpaf1Q811I0 AC153911.1-202ENSMUST00000218534 1034 ntBASIC21.66■■□□□ 1.06
Atpaf1Q811I0 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Atpaf1Q811I0 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Atpaf1Q811I0 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Atpaf1Q811I0 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Atpaf1Q811I0 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Atpaf1Q811I0 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Atpaf1Q811I0 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
Atpaf1Q811I0 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Atpaf1Q811I0 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Atpaf1Q811I0 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Atpaf1Q811I0 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Atpaf1Q811I0 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Atpaf1Q811I0 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Atpaf1Q811I0 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Atpaf1Q811I0 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Atpaf1Q811I0 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
Atpaf1Q811I0 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Atpaf1Q811I0 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Atpaf1Q811I0 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Atpaf1Q811I0 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Atpaf1Q811I0 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Atpaf1Q811I0 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC21.41■■□□□ 1.02
Atpaf1Q811I0 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Atpaf1Q811I0 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC21.39■■□□□ 1.02
Atpaf1Q811I0 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Atpaf1Q811I0 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Atpaf1Q811I0 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Atpaf1Q811I0 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC21.36■■□□□ 1.01
Atpaf1Q811I0 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Atpaf1Q811I0 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Atpaf1Q811I0 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Atpaf1Q811I0 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Atpaf1Q811I0 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Atpaf1Q811I0 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Atpaf1Q811I0 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Atpaf1Q811I0 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Atpaf1Q811I0 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Atpaf1Q811I0 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC21.3■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms