Protein–RNA interactions for Protein: Q80ZA4

Pkhd1l1, Fibrocystin-L, mousemouse

Predictions only

Length 4,249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkhd1l1Q80ZA4 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Pkhd1l1Q80ZA4 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pkhd1l1Q80ZA4 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Pkhd1l1Q80ZA4 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pkhd1l1Q80ZA4 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC17.33■□□□□ 0.36
Pkhd1l1Q80ZA4 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pkhd1l1Q80ZA4 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC17.29■□□□□ 0.36
Pkhd1l1Q80ZA4 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pkhd1l1Q80ZA4 Zfp131-205ENSMUST00000223812 663 ntBASIC17.23■□□□□ 0.35
Pkhd1l1Q80ZA4 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pkhd1l1Q80ZA4 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC17.22■□□□□ 0.35
Pkhd1l1Q80ZA4 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pkhd1l1Q80ZA4 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pkhd1l1Q80ZA4 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pkhd1l1Q80ZA4 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pkhd1l1Q80ZA4 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pkhd1l1Q80ZA4 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pkhd1l1Q80ZA4 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pkhd1l1Q80ZA4 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pkhd1l1Q80ZA4 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pkhd1l1Q80ZA4 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pkhd1l1Q80ZA4 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pkhd1l1Q80ZA4 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pkhd1l1Q80ZA4 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pkhd1l1Q80ZA4 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pkhd1l1Q80ZA4 Gm42596-201ENSMUST00000196305 1958 ntBASIC17.09■□□□□ 0.33
Pkhd1l1Q80ZA4 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Pkhd1l1Q80ZA4 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pkhd1l1Q80ZA4 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pkhd1l1Q80ZA4 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pkhd1l1Q80ZA4 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pkhd1l1Q80ZA4 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pkhd1l1Q80ZA4 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pkhd1l1Q80ZA4 AC166822.3-201ENSMUST00000227394 661 ntBASIC17.03■□□□□ 0.32
Pkhd1l1Q80ZA4 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Pkhd1l1Q80ZA4 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Pkhd1l1Q80ZA4 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pkhd1l1Q80ZA4 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Pkhd1l1Q80ZA4 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pkhd1l1Q80ZA4 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC16.97■□□□□ 0.31
Pkhd1l1Q80ZA4 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pkhd1l1Q80ZA4 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Pkhd1l1Q80ZA4 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Pkhd1l1Q80ZA4 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Pkhd1l1Q80ZA4 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC16.93■□□□□ 0.3
Pkhd1l1Q80ZA4 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pkhd1l1Q80ZA4 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pkhd1l1Q80ZA4 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC16.9■□□□□ 0.3
Pkhd1l1Q80ZA4 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pkhd1l1Q80ZA4 Gm10524-201ENSMUST00000181931 1893 ntBASIC16.86■□□□□ 0.29
Pkhd1l1Q80ZA4 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Pkhd1l1Q80ZA4 CT025624.2-201ENSMUST00000223609 1909 ntBASIC16.86■□□□□ 0.29
Pkhd1l1Q80ZA4 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.29
Pkhd1l1Q80ZA4 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pkhd1l1Q80ZA4 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pkhd1l1Q80ZA4 AL845457.1-201ENSMUST00000197244 68 ntBASIC16.83■□□□□ 0.28
Pkhd1l1Q80ZA4 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Pkhd1l1Q80ZA4 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pkhd1l1Q80ZA4 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pkhd1l1Q80ZA4 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC16.77■□□□□ 0.27
Pkhd1l1Q80ZA4 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Pkhd1l1Q80ZA4 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pkhd1l1Q80ZA4 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC16.74■□□□□ 0.27
Pkhd1l1Q80ZA4 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Pkhd1l1Q80ZA4 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pkhd1l1Q80ZA4 Tdp2-203ENSMUST00000223804 1136 ntBASIC16.7■□□□□ 0.26
Pkhd1l1Q80ZA4 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Pkhd1l1Q80ZA4 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Pkhd1l1Q80ZA4 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Pkhd1l1Q80ZA4 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC16.68■□□□□ 0.26
Pkhd1l1Q80ZA4 Gm16148-201ENSMUST00000119653 893 ntBASIC16.67■□□□□ 0.26
Pkhd1l1Q80ZA4 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pkhd1l1Q80ZA4 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pkhd1l1Q80ZA4 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pkhd1l1Q80ZA4 Peli2-204ENSMUST00000226513 1320 ntBASIC16.65■□□□□ 0.26
Pkhd1l1Q80ZA4 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pkhd1l1Q80ZA4 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC16.65■□□□□ 0.26
Pkhd1l1Q80ZA4 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
Pkhd1l1Q80ZA4 Gm45855-201ENSMUST00000212546 880 ntBASIC16.6■□□□□ 0.25
Pkhd1l1Q80ZA4 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pkhd1l1Q80ZA4 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pkhd1l1Q80ZA4 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC16.59■□□□□ 0.25
Pkhd1l1Q80ZA4 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pkhd1l1Q80ZA4 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
Pkhd1l1Q80ZA4 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC16.57■□□□□ 0.24
Pkhd1l1Q80ZA4 Gm5987-201ENSMUST00000196433 1151 ntBASIC16.57■□□□□ 0.24
Pkhd1l1Q80ZA4 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC16.56■□□□□ 0.24
Pkhd1l1Q80ZA4 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pkhd1l1Q80ZA4 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pkhd1l1Q80ZA4 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pkhd1l1Q80ZA4 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pkhd1l1Q80ZA4 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pkhd1l1Q80ZA4 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pkhd1l1Q80ZA4 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Pkhd1l1Q80ZA4 Zfp131-207ENSMUST00000224946 1783 ntBASIC16.52■□□□□ 0.24
Pkhd1l1Q80ZA4 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC16.52■□□□□ 0.24
Pkhd1l1Q80ZA4 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC16.52■□□□□ 0.23
Pkhd1l1Q80ZA4 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Pkhd1l1Q80ZA4 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pkhd1l1Q80ZA4 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms