Protein–RNA interactions for Protein: Q80YR7

Clspn, Claspin, mousemouse

Predictions only

Length 1,315 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClspnQ80YR7 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC39.37■■■■□ 3.89
ClspnQ80YR7 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC39.3■■■■□ 3.88
ClspnQ80YR7 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC39.27■■■■□ 3.88
ClspnQ80YR7 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC39.27■■■■□ 3.88
ClspnQ80YR7 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC39.25■■■■□ 3.87
ClspnQ80YR7 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC39.23■■■■□ 3.87
ClspnQ80YR7 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC39.23■■■■□ 3.87
ClspnQ80YR7 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC39.2■■■■□ 3.87
ClspnQ80YR7 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC39.18■■■■□ 3.86
ClspnQ80YR7 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC39.15■■■■□ 3.86
ClspnQ80YR7 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC39.12■■■■□ 3.85
ClspnQ80YR7 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC39.1■■■■□ 3.85
ClspnQ80YR7 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC39.09■■■■□ 3.85
ClspnQ80YR7 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC39.09■■■■□ 3.85
ClspnQ80YR7 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC39.06■■■■□ 3.84
ClspnQ80YR7 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC38.97■■■■□ 3.83
ClspnQ80YR7 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC38.96■■■■□ 3.83
ClspnQ80YR7 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC38.94■■■■□ 3.82
ClspnQ80YR7 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC38.93■■■■□ 3.82
ClspnQ80YR7 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC38.91■■■■□ 3.82
ClspnQ80YR7 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC38.87■■■■□ 3.81
ClspnQ80YR7 Rab21-202ENSMUST00000218831 843 ntBASIC38.8■■■■□ 3.8
ClspnQ80YR7 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC38.79■■■■□ 3.8
ClspnQ80YR7 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC38.78■■■■□ 3.8
ClspnQ80YR7 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC38.74■■■■□ 3.79
ClspnQ80YR7 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC38.67■■■■□ 3.78
ClspnQ80YR7 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC38.64■■■■□ 3.78
ClspnQ80YR7 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC38.63■■■■□ 3.77
ClspnQ80YR7 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC38.61■■■■□ 3.77
ClspnQ80YR7 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC38.61■■■■□ 3.77
ClspnQ80YR7 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC38.59■■■■□ 3.77
ClspnQ80YR7 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC38.49■■■■□ 3.75
ClspnQ80YR7 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC38.48■■■■□ 3.75
ClspnQ80YR7 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC38.48■■■■□ 3.75
ClspnQ80YR7 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC38.47■■■■□ 3.75
ClspnQ80YR7 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC38.45■■■■□ 3.75
ClspnQ80YR7 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC38.42■■■■□ 3.74
ClspnQ80YR7 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC38.37■■■■□ 3.73
ClspnQ80YR7 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC38.36■■■■□ 3.73
ClspnQ80YR7 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC38.35■■■■□ 3.73
ClspnQ80YR7 Gm25262-201ENSMUST00000174934 133 ntBASIC38.3■■■■□ 3.72
ClspnQ80YR7 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC38.3■■■■□ 3.72
ClspnQ80YR7 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC38.29■■■■□ 3.72
ClspnQ80YR7 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC38.26■■■■□ 3.72
ClspnQ80YR7 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC38.26■■■■□ 3.72
ClspnQ80YR7 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC38.21■■■■□ 3.71
ClspnQ80YR7 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC38.17■■■■□ 3.7
ClspnQ80YR7 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC38.17■■■■□ 3.7
ClspnQ80YR7 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC38.15■■■■□ 3.7
ClspnQ80YR7 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC38.13■■■■□ 3.69
ClspnQ80YR7 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC38.07■■■■□ 3.68
ClspnQ80YR7 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC38.07■■■■□ 3.68
ClspnQ80YR7 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC38.03■■■■□ 3.68
ClspnQ80YR7 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC38.02■■■■□ 3.68
ClspnQ80YR7 Gm2415-204ENSMUST00000190235 2004 ntBASIC38.01■■■■□ 3.67
ClspnQ80YR7 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC38■■■■□ 3.67
ClspnQ80YR7 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC37.98■■■■□ 3.67
ClspnQ80YR7 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC37.98■■■■□ 3.67
ClspnQ80YR7 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC37.97■■■■□ 3.67
ClspnQ80YR7 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC37.95■■■■□ 3.67
ClspnQ80YR7 Zfp131-207ENSMUST00000224946 1783 ntBASIC37.94■■■■□ 3.66
ClspnQ80YR7 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC37.92■■■■□ 3.66
ClspnQ80YR7 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC37.91■■■■□ 3.66
ClspnQ80YR7 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC37.88■■■■□ 3.65
ClspnQ80YR7 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC37.88■■■■□ 3.65
ClspnQ80YR7 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC37.88■■■■□ 3.65
ClspnQ80YR7 AC153504.1-201ENSMUST00000218379 2290 ntBASIC37.87■■■■□ 3.65
ClspnQ80YR7 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC37.83■■■■□ 3.65
ClspnQ80YR7 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC37.8■■■■□ 3.64
ClspnQ80YR7 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC37.8■■■■□ 3.64
ClspnQ80YR7 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC37.78■■■■□ 3.64
ClspnQ80YR7 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC37.77■■■■□ 3.64
ClspnQ80YR7 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC37.74■■■■□ 3.63
ClspnQ80YR7 Gm6658-202ENSMUST00000209493 1885 ntBASIC37.7■■■■□ 3.63
ClspnQ80YR7 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC37.68■■■■□ 3.62
ClspnQ80YR7 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC37.68■■■■□ 3.62
ClspnQ80YR7 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC37.67■■■■□ 3.62
ClspnQ80YR7 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC37.63■■■■□ 3.61
ClspnQ80YR7 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC37.62■■■■□ 3.61
ClspnQ80YR7 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC37.61■■■■□ 3.61
ClspnQ80YR7 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC37.6■■■■□ 3.61
ClspnQ80YR7 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC37.59■■■■□ 3.61
ClspnQ80YR7 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC37.56■■■■□ 3.6
ClspnQ80YR7 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC37.55■■■■□ 3.6
ClspnQ80YR7 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC37.54■■■■□ 3.6
ClspnQ80YR7 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC37.54■■■■□ 3.6
ClspnQ80YR7 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC37.53■■■■□ 3.6
ClspnQ80YR7 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC37.52■■■■□ 3.6
ClspnQ80YR7 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC37.5■■■■□ 3.59
ClspnQ80YR7 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC37.45■■■■□ 3.59
ClspnQ80YR7 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC37.44■■■■□ 3.58
ClspnQ80YR7 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC37.43■■■■□ 3.58
ClspnQ80YR7 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC37.42■■■■□ 3.58
ClspnQ80YR7 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC37.42■■■■□ 3.58
ClspnQ80YR7 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC37.35■■■■□ 3.57
ClspnQ80YR7 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC37.35■■■■□ 3.57
ClspnQ80YR7 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC37.34■■■■□ 3.57
ClspnQ80YR7 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC37.34■■■■□ 3.57
ClspnQ80YR7 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC37.3■■■■□ 3.56
ClspnQ80YR7 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC37.3■■■■□ 3.56
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms