Protein–RNA interactions for Protein: Q80WR1

Tspan18, Tetraspanin-18, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tspan18Q80WR1 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
Tspan18Q80WR1 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
Tspan18Q80WR1 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC30.15■■■□□ 2.42
Tspan18Q80WR1 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Tspan18Q80WR1 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC30.12■■■□□ 2.41
Tspan18Q80WR1 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC30.11■■■□□ 2.41
Tspan18Q80WR1 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC30.08■■■□□ 2.41
Tspan18Q80WR1 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
Tspan18Q80WR1 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
Tspan18Q80WR1 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC30.03■■■□□ 2.4
Tspan18Q80WR1 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC30.01■■■□□ 2.4
Tspan18Q80WR1 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC30■■■□□ 2.39
Tspan18Q80WR1 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
Tspan18Q80WR1 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
Tspan18Q80WR1 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
Tspan18Q80WR1 Gm26115-201ENSMUST00000175605 87 ntBASIC29.91■■■□□ 2.38
Tspan18Q80WR1 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
Tspan18Q80WR1 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC29.86■■■□□ 2.37
Tspan18Q80WR1 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
Tspan18Q80WR1 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
Tspan18Q80WR1 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
Tspan18Q80WR1 Gm17082-201ENSMUST00000166043 1091 ntBASIC29.71■■■□□ 2.35
Tspan18Q80WR1 Gm8109-201ENSMUST00000194076 746 ntBASIC29.7■■■□□ 2.35
Tspan18Q80WR1 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
Tspan18Q80WR1 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC29.65■■■□□ 2.34
Tspan18Q80WR1 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC29.64■■■□□ 2.34
Tspan18Q80WR1 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
Tspan18Q80WR1 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
Tspan18Q80WR1 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC29.63■■■□□ 2.33
Tspan18Q80WR1 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
Tspan18Q80WR1 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC29.58■■■□□ 2.33
Tspan18Q80WR1 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC29.55■■■□□ 2.32
Tspan18Q80WR1 Gm27322-201ENSMUST00000184007 104 ntBASIC29.52■■■□□ 2.32
Tspan18Q80WR1 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
Tspan18Q80WR1 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC29.51■■■□□ 2.31
Tspan18Q80WR1 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC29.5■■■□□ 2.31
Tspan18Q80WR1 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC29.5■■■□□ 2.31
Tspan18Q80WR1 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
Tspan18Q80WR1 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC29.49■■■□□ 2.31
Tspan18Q80WR1 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC29.47■■■□□ 2.31
Tspan18Q80WR1 Zfp131-207ENSMUST00000224946 1783 ntBASIC29.42■■■□□ 2.3
Tspan18Q80WR1 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
Tspan18Q80WR1 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC29.38■■■□□ 2.29
Tspan18Q80WR1 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
Tspan18Q80WR1 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC29.35■■■□□ 2.29
Tspan18Q80WR1 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
Tspan18Q80WR1 AL845457.1-201ENSMUST00000197244 68 ntBASIC29.31■■■□□ 2.28
Tspan18Q80WR1 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
Tspan18Q80WR1 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
Tspan18Q80WR1 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC29.28■■■□□ 2.28
Tspan18Q80WR1 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
Tspan18Q80WR1 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
Tspan18Q80WR1 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
Tspan18Q80WR1 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC29.18■■■□□ 2.26
Tspan18Q80WR1 AC166822.3-201ENSMUST00000227394 661 ntBASIC29.15■■■□□ 2.26
Tspan18Q80WR1 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
Tspan18Q80WR1 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
Tspan18Q80WR1 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
Tspan18Q80WR1 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC29.12■■■□□ 2.25
Tspan18Q80WR1 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
Tspan18Q80WR1 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
Tspan18Q80WR1 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
Tspan18Q80WR1 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
Tspan18Q80WR1 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
Tspan18Q80WR1 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
Tspan18Q80WR1 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC28.91■■■□□ 2.22
Tspan18Q80WR1 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC28.9■■■□□ 2.22
Tspan18Q80WR1 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC28.89■■■□□ 2.22
Tspan18Q80WR1 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
Tspan18Q80WR1 Gm24804-201ENSMUST00000174982 85 ntBASIC28.88■■■□□ 2.21
Tspan18Q80WR1 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
Tspan18Q80WR1 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC28.84■■■□□ 2.21
Tspan18Q80WR1 Mipep-204ENSMUST00000225043 1548 ntBASIC28.81■■■□□ 2.2
Tspan18Q80WR1 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
Tspan18Q80WR1 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
Tspan18Q80WR1 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
Tspan18Q80WR1 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
Tspan18Q80WR1 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
Tspan18Q80WR1 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
Tspan18Q80WR1 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
Tspan18Q80WR1 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
Tspan18Q80WR1 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC28.73■■■□□ 2.19
Tspan18Q80WR1 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
Tspan18Q80WR1 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC28.7■■■□□ 2.18
Tspan18Q80WR1 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
Tspan18Q80WR1 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Tspan18Q80WR1 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC28.66■■■□□ 2.18
Tspan18Q80WR1 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
Tspan18Q80WR1 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC28.6■■■□□ 2.17
Tspan18Q80WR1 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC28.6■■■□□ 2.17
Tspan18Q80WR1 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Tspan18Q80WR1 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC28.57■■■□□ 2.16
Tspan18Q80WR1 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
Tspan18Q80WR1 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
Tspan18Q80WR1 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
Tspan18Q80WR1 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC28.56■■■□□ 2.16
Tspan18Q80WR1 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
Tspan18Q80WR1 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
Tspan18Q80WR1 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Tspan18Q80WR1 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms