Protein–RNA interactions for Protein: Q6TU36

Defb50, Beta-defensin 50, mousemouse

Predictions only

Length 73 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Defb50Q6TU36 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Defb50Q6TU36 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Defb50Q6TU36 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Defb50Q6TU36 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Defb50Q6TU36 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Defb50Q6TU36 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC18.28■□□□□ 0.52
Defb50Q6TU36 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Defb50Q6TU36 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Defb50Q6TU36 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Defb50Q6TU36 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Defb50Q6TU36 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC18.21■□□□□ 0.51
Defb50Q6TU36 Gm27325-201ENSMUST00000175467 74 ntBASIC18.18■□□□□ 0.5
Defb50Q6TU36 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Defb50Q6TU36 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Defb50Q6TU36 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC18.15■□□□□ 0.5
Defb50Q6TU36 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Defb50Q6TU36 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Defb50Q6TU36 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC18.11■□□□□ 0.49
Defb50Q6TU36 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Defb50Q6TU36 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Defb50Q6TU36 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Defb50Q6TU36 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Defb50Q6TU36 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Defb50Q6TU36 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Defb50Q6TU36 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Defb50Q6TU36 Gm2415-204ENSMUST00000190235 2004 ntBASIC17.96■□□□□ 0.47
Defb50Q6TU36 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Defb50Q6TU36 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Defb50Q6TU36 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Defb50Q6TU36 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC17.93■□□□□ 0.46
Defb50Q6TU36 AC153504.1-201ENSMUST00000218379 2290 ntBASIC17.92■□□□□ 0.46
Defb50Q6TU36 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC17.92■□□□□ 0.46
Defb50Q6TU36 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Defb50Q6TU36 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Defb50Q6TU36 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
Defb50Q6TU36 Zfp131-207ENSMUST00000224946 1783 ntBASIC17.89■□□□□ 0.45
Defb50Q6TU36 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Defb50Q6TU36 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Defb50Q6TU36 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Defb50Q6TU36 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Defb50Q6TU36 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Defb50Q6TU36 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Defb50Q6TU36 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Defb50Q6TU36 Gm6658-202ENSMUST00000209493 1885 ntBASIC17.82■□□□□ 0.44
Defb50Q6TU36 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Defb50Q6TU36 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC17.8■□□□□ 0.44
Defb50Q6TU36 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Defb50Q6TU36 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC17.78■□□□□ 0.44
Defb50Q6TU36 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Defb50Q6TU36 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Defb50Q6TU36 Gm25238-201ENSMUST00000174914 89 ntBASIC17.77■□□□□ 0.44
Defb50Q6TU36 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.43
Defb50Q6TU36 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Defb50Q6TU36 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Defb50Q6TU36 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Defb50Q6TU36 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Defb50Q6TU36 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Defb50Q6TU36 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Defb50Q6TU36 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Defb50Q6TU36 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
Defb50Q6TU36 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Defb50Q6TU36 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC17.66■□□□□ 0.42
Defb50Q6TU36 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC17.65■□□□□ 0.42
Defb50Q6TU36 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC17.64■□□□□ 0.41
Defb50Q6TU36 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Defb50Q6TU36 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC17.63■□□□□ 0.41
Defb50Q6TU36 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Defb50Q6TU36 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Defb50Q6TU36 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Defb50Q6TU36 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Defb50Q6TU36 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Defb50Q6TU36 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Defb50Q6TU36 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Defb50Q6TU36 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Defb50Q6TU36 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Defb50Q6TU36 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Defb50Q6TU36 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Defb50Q6TU36 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Defb50Q6TU36 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Defb50Q6TU36 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Defb50Q6TU36 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Defb50Q6TU36 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
Defb50Q6TU36 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Defb50Q6TU36 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Defb50Q6TU36 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Defb50Q6TU36 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Defb50Q6TU36 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC17.49■□□□□ 0.39
Defb50Q6TU36 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Defb50Q6TU36 Gm9905-201ENSMUST00000065740 1845 ntBASIC17.47■□□□□ 0.39
Defb50Q6TU36 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
Defb50Q6TU36 Gm6206-201ENSMUST00000133472 2199 ntBASIC17.46■□□□□ 0.39
Defb50Q6TU36 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Defb50Q6TU36 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC17.45■□□□□ 0.38
Defb50Q6TU36 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC17.45■□□□□ 0.38
Defb50Q6TU36 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Defb50Q6TU36 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Defb50Q6TU36 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Defb50Q6TU36 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Defb50Q6TU36 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Defb50Q6TU36 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms