Protein–RNA interactions for Protein: Q6PIJ4

Nfrkb, Nuclear factor related to kappa-B-binding protein, mousemouse

Known RBP Predictions only

Length 1,296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NfrkbQ6PIJ4 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC31.72■■■□□ 2.67
NfrkbQ6PIJ4 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
NfrkbQ6PIJ4 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
NfrkbQ6PIJ4 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
NfrkbQ6PIJ4 Gm10524-201ENSMUST00000181931 1893 ntBASIC31.58■■■□□ 2.65
NfrkbQ6PIJ4 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
NfrkbQ6PIJ4 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC31.55■■■□□ 2.64
NfrkbQ6PIJ4 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
NfrkbQ6PIJ4 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
NfrkbQ6PIJ4 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
NfrkbQ6PIJ4 Gm27322-201ENSMUST00000184007 104 ntBASIC31.51■■■□□ 2.63
NfrkbQ6PIJ4 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC31.5■■■□□ 2.63
NfrkbQ6PIJ4 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
NfrkbQ6PIJ4 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC31.47■■■□□ 2.63
NfrkbQ6PIJ4 CT025624.2-201ENSMUST00000223609 1909 ntBASIC31.43■■■□□ 2.62
NfrkbQ6PIJ4 Gm42596-201ENSMUST00000196305 1958 ntBASIC31.41■■■□□ 2.62
NfrkbQ6PIJ4 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC31.4■■■□□ 2.62
NfrkbQ6PIJ4 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
NfrkbQ6PIJ4 Gm24804-201ENSMUST00000174982 85 ntBASIC31.37■■■□□ 2.61
NfrkbQ6PIJ4 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
NfrkbQ6PIJ4 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
NfrkbQ6PIJ4 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
NfrkbQ6PIJ4 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC31.19■■■□□ 2.58
NfrkbQ6PIJ4 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
NfrkbQ6PIJ4 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
NfrkbQ6PIJ4 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC31.07■■■□□ 2.56
NfrkbQ6PIJ4 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC31.05■■■□□ 2.56
NfrkbQ6PIJ4 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
NfrkbQ6PIJ4 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
NfrkbQ6PIJ4 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
NfrkbQ6PIJ4 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
NfrkbQ6PIJ4 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC30.95■■■□□ 2.55
NfrkbQ6PIJ4 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC30.94■■■□□ 2.54
NfrkbQ6PIJ4 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC30.89■■■□□ 2.54
NfrkbQ6PIJ4 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC30.87■■■□□ 2.53
NfrkbQ6PIJ4 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
NfrkbQ6PIJ4 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC30.81■■■□□ 2.52
NfrkbQ6PIJ4 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
NfrkbQ6PIJ4 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
NfrkbQ6PIJ4 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
NfrkbQ6PIJ4 AC166822.3-201ENSMUST00000227394 661 ntBASIC30.78■■■□□ 2.52
NfrkbQ6PIJ4 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC30.78■■■□□ 2.52
NfrkbQ6PIJ4 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC30.75■■■□□ 2.51
NfrkbQ6PIJ4 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
NfrkbQ6PIJ4 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
NfrkbQ6PIJ4 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
NfrkbQ6PIJ4 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC30.7■■■□□ 2.5
NfrkbQ6PIJ4 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC30.7■■■□□ 2.5
NfrkbQ6PIJ4 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
NfrkbQ6PIJ4 AL845457.1-201ENSMUST00000197244 68 ntBASIC30.68■■■□□ 2.5
NfrkbQ6PIJ4 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
NfrkbQ6PIJ4 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC30.67■■■□□ 2.5
NfrkbQ6PIJ4 Zfp131-205ENSMUST00000223812 663 ntBASIC30.65■■■□□ 2.5
NfrkbQ6PIJ4 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
NfrkbQ6PIJ4 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
NfrkbQ6PIJ4 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
NfrkbQ6PIJ4 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
NfrkbQ6PIJ4 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
NfrkbQ6PIJ4 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
NfrkbQ6PIJ4 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC30.53■■■□□ 2.48
NfrkbQ6PIJ4 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC30.52■■■□□ 2.48
NfrkbQ6PIJ4 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC30.51■■■□□ 2.48
NfrkbQ6PIJ4 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
NfrkbQ6PIJ4 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
NfrkbQ6PIJ4 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
NfrkbQ6PIJ4 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC30.38■■■□□ 2.45
NfrkbQ6PIJ4 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC30.38■■■□□ 2.45
NfrkbQ6PIJ4 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC30.37■■■□□ 2.45
NfrkbQ6PIJ4 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
NfrkbQ6PIJ4 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
NfrkbQ6PIJ4 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
NfrkbQ6PIJ4 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC30.36■■■□□ 2.45
NfrkbQ6PIJ4 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
NfrkbQ6PIJ4 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
NfrkbQ6PIJ4 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC30.3■■■□□ 2.44
NfrkbQ6PIJ4 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC30.3■■■□□ 2.44
NfrkbQ6PIJ4 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
NfrkbQ6PIJ4 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC30.28■■■□□ 2.44
NfrkbQ6PIJ4 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC30.27■■■□□ 2.44
NfrkbQ6PIJ4 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC30.25■■■□□ 2.43
NfrkbQ6PIJ4 Zfp131-207ENSMUST00000224946 1783 ntBASIC30.25■■■□□ 2.43
NfrkbQ6PIJ4 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
NfrkbQ6PIJ4 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
NfrkbQ6PIJ4 Gm16148-201ENSMUST00000119653 893 ntBASIC30.18■■■□□ 2.42
NfrkbQ6PIJ4 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC30.14■■■□□ 2.42
NfrkbQ6PIJ4 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
NfrkbQ6PIJ4 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC30.1■■■□□ 2.41
NfrkbQ6PIJ4 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
NfrkbQ6PIJ4 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
NfrkbQ6PIJ4 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
NfrkbQ6PIJ4 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC30.07■■■□□ 2.4
NfrkbQ6PIJ4 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
NfrkbQ6PIJ4 Peli2-204ENSMUST00000226513 1320 ntBASIC30.04■■■□□ 2.4
NfrkbQ6PIJ4 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
NfrkbQ6PIJ4 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
NfrkbQ6PIJ4 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
NfrkbQ6PIJ4 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
NfrkbQ6PIJ4 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC29.99■■■□□ 2.39
NfrkbQ6PIJ4 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC29.97■■■□□ 2.39
NfrkbQ6PIJ4 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
Retrieved 100 of 76,532 protein–RNA pairs in 117.4 ms