Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC35,65■■■■□ 3,3
Col11a2Q64739 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC35,64■■■■□ 3,3
Col11a2Q64739 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC35,63■■■■□ 3,29
Col11a2Q64739 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC35,58■■■■□ 3,29
Col11a2Q64739 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC35,52■■■■□ 3,28
Col11a2Q64739 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC35,52■■■■□ 3,28
Col11a2Q64739 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC35,51■■■■□ 3,28
Col11a2Q64739 Zfp131-205ENSMUST00000223812 663 ntBASIC35,43■■■■□ 3,26
Col11a2Q64739 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC35,41■■■■□ 3,26
Col11a2Q64739 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC35,41■■■■□ 3,26
Col11a2Q64739 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC35,4■■■■□ 3,26
Col11a2Q64739 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC35,39■■■■□ 3,26
Col11a2Q64739 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC35,36■■■■□ 3,25
Col11a2Q64739 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC35,35■■■■□ 3,25
Col11a2Q64739 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC35,31■■■■□ 3,24
Col11a2Q64739 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC35,28■■■■□ 3,24
Col11a2Q64739 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC35,2■■■■□ 3,23
Col11a2Q64739 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC35,18■■■■□ 3,22
Col11a2Q64739 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC35,17■■■■□ 3,22
Col11a2Q64739 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC35,14■■■■□ 3,22
Col11a2Q64739 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC35,09■■■■□ 3,21
Col11a2Q64739 Gm42596-201ENSMUST00000196305 1958 ntBASIC35,09■■■■□ 3,21
Col11a2Q64739 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC35,08■■■■□ 3,21
Col11a2Q64739 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC35,02■■■■□ 3,2
Col11a2Q64739 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC35,02■■■■□ 3,2
Col11a2Q64739 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC35,01■■■■□ 3,2
Col11a2Q64739 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC35,01■■■■□ 3,19
Col11a2Q64739 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC35■■■■□ 3,19
Col11a2Q64739 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC34,97■■■■□ 3,19
Col11a2Q64739 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC34,96■■■■□ 3,19
Col11a2Q64739 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC34,9■■■■□ 3,18
Col11a2Q64739 AC166822.3-201ENSMUST00000227394 661 ntBASIC34,89■■■■□ 3,18
Col11a2Q64739 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC34,88■■■■□ 3,17
Col11a2Q64739 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC34,86■■■■□ 3,17
Col11a2Q64739 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC34,86■■■■□ 3,17
Col11a2Q64739 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC34,85■■■■□ 3,17
Col11a2Q64739 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC34,84■■■■□ 3,17
Col11a2Q64739 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC34,83■■■■□ 3,17
Col11a2Q64739 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC34,83■■■■□ 3,17
Col11a2Q64739 CT025624.2-201ENSMUST00000223609 1909 ntBASIC34,81■■■■□ 3,16
Col11a2Q64739 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC34,78■■■■□ 3,16
Col11a2Q64739 Gm10524-201ENSMUST00000181931 1893 ntBASIC34,78■■■■□ 3,16
Col11a2Q64739 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC34,76■■■■□ 3,16
Col11a2Q64739 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC34,75■■■■□ 3,15
Col11a2Q64739 AL845457.1-201ENSMUST00000197244 68 ntBASIC34,7■■■■□ 3,15
Col11a2Q64739 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC34,69■■■■□ 3,14
Col11a2Q64739 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC34,67■■■■□ 3,14
Col11a2Q64739 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC34,67■■■■□ 3,14
Col11a2Q64739 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC34,64■■■■□ 3,14
Col11a2Q64739 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC34,64■■■■□ 3,14
Col11a2Q64739 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC34,63■■■■□ 3,13
Col11a2Q64739 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC34,61■■■■□ 3,13
Col11a2Q64739 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC34,57■■■■□ 3,12
Col11a2Q64739 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC34,55■■■■□ 3,12
Col11a2Q64739 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC34,55■■■■□ 3,12
Col11a2Q64739 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC34,54■■■■□ 3,12
Col11a2Q64739 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC34,53■■■■□ 3,12
Col11a2Q64739 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC34,48■■■■□ 3,11
Col11a2Q64739 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC34,48■■■■□ 3,11
Col11a2Q64739 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC34,47■■■■□ 3,11
Col11a2Q64739 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC34,46■■■■□ 3,11
Col11a2Q64739 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC34,45■■■■□ 3,1
Col11a2Q64739 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC34,35■■■■□ 3,09
Col11a2Q64739 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC34,33■■■■□ 3,09
Col11a2Q64739 Gm16148-201ENSMUST00000119653 893 ntBASIC34,29■■■■□ 3,08
Col11a2Q64739 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC34,26■■■■□ 3,07
Col11a2Q64739 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC34,24■■■■□ 3,07
Col11a2Q64739 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC34,24■■■■□ 3,07
Col11a2Q64739 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC34,24■■■■□ 3,07
Col11a2Q64739 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC34,23■■■■□ 3,07
Col11a2Q64739 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC34,22■■■■□ 3,07
Col11a2Q64739 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC34,21■■■■□ 3,07
Col11a2Q64739 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC34,16■■■■□ 3,06
Col11a2Q64739 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC34,15■■■■□ 3,06
Col11a2Q64739 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC34,14■■■■□ 3,06
Col11a2Q64739 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC34,08■■■■□ 3,05
Col11a2Q64739 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC34,06■■■■□ 3,04
Col11a2Q64739 Tdp2-203ENSMUST00000223804 1136 ntBASIC34,05■■■■□ 3,04
Col11a2Q64739 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC34,05■■■■□ 3,04
Col11a2Q64739 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC34,04■■■■□ 3,04
Col11a2Q64739 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC34,03■■■■□ 3,04
Col11a2Q64739 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC34,01■■■■□ 3,04
Col11a2Q64739 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC34,01■■■■□ 3,04
Col11a2Q64739 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC33,99■■■■□ 3,03
Col11a2Q64739 Peli2-204ENSMUST00000226513 1320 ntBASIC33,99■■■■□ 3,03
Col11a2Q64739 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC33,99■■■■□ 3,03
Col11a2Q64739 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC33,98■■■■□ 3,03
Col11a2Q64739 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC33,98■■■■□ 3,03
Col11a2Q64739 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC33,96■■■■□ 3,03
Col11a2Q64739 Zfp131-207ENSMUST00000224946 1783 ntBASIC33,95■■■■□ 3,02
Col11a2Q64739 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC33,95■■■■□ 3,02
Col11a2Q64739 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC33,94■■■■□ 3,02
Col11a2Q64739 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC33,93■■■■□ 3,02
Col11a2Q64739 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC33,92■■■■□ 3,02
Col11a2Q64739 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC33,92■■■■□ 3,02
Col11a2Q64739 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC33,83■■■■□ 3,01
Col11a2Q64739 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC33,83■■■■□ 3,01
Col11a2Q64739 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC33,82■■■■□ 3
Col11a2Q64739 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC33,81■■■■□ 3
Col11a2Q64739 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC33,8■■■■□ 3
Retrieved 100 of 76,532 protein–RNA pairs in 11,5 ms