Protein–RNA interactions for Protein: Q61496

Ddx4, ATP-dependent RNA helicase DDX4, mousemouse

Predictions only

Length 702 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx4Q61496 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC31.66■■■□□ 2.66
Ddx4Q61496 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
Ddx4Q61496 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC31.58■■■□□ 2.65
Ddx4Q61496 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC31.55■■■□□ 2.64
Ddx4Q61496 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
Ddx4Q61496 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
Ddx4Q61496 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Ddx4Q61496 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Ddx4Q61496 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Ddx4Q61496 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Ddx4Q61496 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
Ddx4Q61496 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
Ddx4Q61496 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Ddx4Q61496 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC31.38■■■□□ 2.61
Ddx4Q61496 Gm10524-201ENSMUST00000181931 1893 ntBASIC31.31■■■□□ 2.6
Ddx4Q61496 Gm42596-201ENSMUST00000196305 1958 ntBASIC31.31■■■□□ 2.6
Ddx4Q61496 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC31.29■■■□□ 2.6
Ddx4Q61496 CT025624.2-201ENSMUST00000223609 1909 ntBASIC31.28■■■□□ 2.6
Ddx4Q61496 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
Ddx4Q61496 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Ddx4Q61496 Zfp131-205ENSMUST00000223812 663 ntBASIC31.23■■■□□ 2.59
Ddx4Q61496 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC31.18■■■□□ 2.58
Ddx4Q61496 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Ddx4Q61496 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
Ddx4Q61496 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Ddx4Q61496 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
Ddx4Q61496 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
Ddx4Q61496 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC31.07■■■□□ 2.56
Ddx4Q61496 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC31.06■■■□□ 2.56
Ddx4Q61496 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC31.04■■■□□ 2.56
Ddx4Q61496 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC31.03■■■□□ 2.56
Ddx4Q61496 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Ddx4Q61496 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC31■■■□□ 2.55
Ddx4Q61496 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
Ddx4Q61496 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC30.98■■■□□ 2.55
Ddx4Q61496 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
Ddx4Q61496 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
Ddx4Q61496 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
Ddx4Q61496 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC30.88■■■□□ 2.53
Ddx4Q61496 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC30.87■■■□□ 2.53
Ddx4Q61496 AC166822.3-201ENSMUST00000227394 661 ntBASIC30.87■■■□□ 2.53
Ddx4Q61496 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
Ddx4Q61496 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC30.82■■■□□ 2.52
Ddx4Q61496 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
Ddx4Q61496 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
Ddx4Q61496 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC30.8■■■□□ 2.52
Ddx4Q61496 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
Ddx4Q61496 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
Ddx4Q61496 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC30.77■■■□□ 2.52
Ddx4Q61496 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.52
Ddx4Q61496 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
Ddx4Q61496 AL845457.1-201ENSMUST00000197244 68 ntBASIC30.74■■■□□ 2.51
Ddx4Q61496 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
Ddx4Q61496 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC30.69■■■□□ 2.5
Ddx4Q61496 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
Ddx4Q61496 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Ddx4Q61496 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
Ddx4Q61496 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
Ddx4Q61496 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
Ddx4Q61496 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC30.48■■■□□ 2.47
Ddx4Q61496 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC30.45■■■□□ 2.46
Ddx4Q61496 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
Ddx4Q61496 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC30.42■■■□□ 2.46
Ddx4Q61496 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
Ddx4Q61496 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
Ddx4Q61496 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
Ddx4Q61496 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC30.39■■■□□ 2.46
Ddx4Q61496 Gm16148-201ENSMUST00000119653 893 ntBASIC30.37■■■□□ 2.45
Ddx4Q61496 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
Ddx4Q61496 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC30.36■■■□□ 2.45
Ddx4Q61496 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Ddx4Q61496 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC30.33■■■□□ 2.45
Ddx4Q61496 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC30.28■■■□□ 2.44
Ddx4Q61496 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Ddx4Q61496 Tdp2-203ENSMUST00000223804 1136 ntBASIC30.27■■■□□ 2.44
Ddx4Q61496 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC30.23■■■□□ 2.43
Ddx4Q61496 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC30.23■■■□□ 2.43
Ddx4Q61496 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
Ddx4Q61496 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
Ddx4Q61496 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC30.19■■■□□ 2.42
Ddx4Q61496 Zfp131-207ENSMUST00000224946 1783 ntBASIC30.18■■■□□ 2.42
Ddx4Q61496 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
Ddx4Q61496 Peli2-204ENSMUST00000226513 1320 ntBASIC30.16■■■□□ 2.42
Ddx4Q61496 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC30.15■■■□□ 2.42
Ddx4Q61496 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
Ddx4Q61496 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC30.11■■■□□ 2.41
Ddx4Q61496 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
Ddx4Q61496 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
Ddx4Q61496 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
Ddx4Q61496 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
Ddx4Q61496 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC30.08■■■□□ 2.41
Ddx4Q61496 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC30.07■■■□□ 2.4
Ddx4Q61496 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC30.06■■■□□ 2.4
Ddx4Q61496 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
Ddx4Q61496 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC30.04■■■□□ 2.4
Ddx4Q61496 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC30.01■■■□□ 2.39
Ddx4Q61496 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC30.01■■■□□ 2.39
Ddx4Q61496 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
Ddx4Q61496 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC29.98■■■□□ 2.39
Ddx4Q61496 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC29.96■■■□□ 2.39
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms