Protein–RNA interactions for Protein: Q5S006

Lrrk2, Leucine-rich repeat serine/threonine-protein kinase 2, mousemouse

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrk2Q5S006 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC25.64■■□□□ 1.69
Lrrk2Q5S006 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC25.6■■□□□ 1.69
Lrrk2Q5S006 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
Lrrk2Q5S006 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
Lrrk2Q5S006 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC25.59■■□□□ 1.69
Lrrk2Q5S006 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC25.57■■□□□ 1.68
Lrrk2Q5S006 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Lrrk2Q5S006 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Lrrk2Q5S006 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC25.45■■□□□ 1.66
Lrrk2Q5S006 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC25.44■■□□□ 1.66
Lrrk2Q5S006 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Lrrk2Q5S006 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC25.4■■□□□ 1.66
Lrrk2Q5S006 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Lrrk2Q5S006 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
Lrrk2Q5S006 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC25.33■■□□□ 1.65
Lrrk2Q5S006 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Lrrk2Q5S006 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Lrrk2Q5S006 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Lrrk2Q5S006 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC25.23■■□□□ 1.63
Lrrk2Q5S006 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Lrrk2Q5S006 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
Lrrk2Q5S006 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Lrrk2Q5S006 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Lrrk2Q5S006 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Lrrk2Q5S006 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Lrrk2Q5S006 AC166822.3-201ENSMUST00000227394 661 ntBASIC25.16■■□□□ 1.62
Lrrk2Q5S006 Psd-208ENSMUST00000224556 2034 ntBASIC25.15■■□□□ 1.62
Lrrk2Q5S006 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC25.15■■□□□ 1.62
Lrrk2Q5S006 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Lrrk2Q5S006 Tdp2-203ENSMUST00000223804 1136 ntBASIC25.14■■□□□ 1.61
Lrrk2Q5S006 Gm5987-201ENSMUST00000196433 1151 ntBASIC25.09■■□□□ 1.61
Lrrk2Q5S006 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.6
Lrrk2Q5S006 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC25.06■■□□□ 1.6
Lrrk2Q5S006 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC25.05■■□□□ 1.6
Lrrk2Q5S006 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC25.03■■□□□ 1.6
Lrrk2Q5S006 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC25.02■■□□□ 1.6
Lrrk2Q5S006 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC25■■□□□ 1.59
Lrrk2Q5S006 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC24.99■■□□□ 1.59
Lrrk2Q5S006 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
Lrrk2Q5S006 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Lrrk2Q5S006 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC24.96■■□□□ 1.59
Lrrk2Q5S006 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
Lrrk2Q5S006 Gm16148-201ENSMUST00000119653 893 ntBASIC24.93■■□□□ 1.58
Lrrk2Q5S006 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC24.92■■□□□ 1.58
Lrrk2Q5S006 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Lrrk2Q5S006 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Lrrk2Q5S006 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC24.81■■□□□ 1.56
Lrrk2Q5S006 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC24.81■■□□□ 1.56
Lrrk2Q5S006 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC24.81■■□□□ 1.56
Lrrk2Q5S006 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Lrrk2Q5S006 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC24.8■■□□□ 1.56
Lrrk2Q5S006 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
Lrrk2Q5S006 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
Lrrk2Q5S006 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC24.77■■□□□ 1.56
Lrrk2Q5S006 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC24.76■■□□□ 1.55
Lrrk2Q5S006 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC24.76■■□□□ 1.55
Lrrk2Q5S006 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Lrrk2Q5S006 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Lrrk2Q5S006 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Lrrk2Q5S006 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Lrrk2Q5S006 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC24.69■■□□□ 1.54
Lrrk2Q5S006 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Lrrk2Q5S006 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Lrrk2Q5S006 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC24.66■■□□□ 1.54
Lrrk2Q5S006 Gm45855-201ENSMUST00000212546 880 ntBASIC24.66■■□□□ 1.54
Lrrk2Q5S006 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
Lrrk2Q5S006 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC24.65■■□□□ 1.54
Lrrk2Q5S006 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC24.64■■□□□ 1.54
Lrrk2Q5S006 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Lrrk2Q5S006 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Lrrk2Q5S006 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.52
Lrrk2Q5S006 Gm42596-201ENSMUST00000196305 1958 ntBASIC24.54■■□□□ 1.52
Lrrk2Q5S006 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Lrrk2Q5S006 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC24.53■■□□□ 1.52
Lrrk2Q5S006 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
Lrrk2Q5S006 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Lrrk2Q5S006 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC24.5■■□□□ 1.51
Lrrk2Q5S006 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Lrrk2Q5S006 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC24.45■■□□□ 1.51
Lrrk2Q5S006 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
Lrrk2Q5S006 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Lrrk2Q5S006 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC24.44■■□□□ 1.5
Lrrk2Q5S006 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC24.43■■□□□ 1.5
Lrrk2Q5S006 CT025624.2-201ENSMUST00000223609 1909 ntBASIC24.42■■□□□ 1.5
Lrrk2Q5S006 Gm10524-201ENSMUST00000181931 1893 ntBASIC24.42■■□□□ 1.5
Lrrk2Q5S006 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Lrrk2Q5S006 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Lrrk2Q5S006 AL845457.1-201ENSMUST00000197244 68 ntBASIC24.41■■□□□ 1.5
Lrrk2Q5S006 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Lrrk2Q5S006 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Lrrk2Q5S006 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Lrrk2Q5S006 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Lrrk2Q5S006 Peli2-204ENSMUST00000226513 1320 ntBASIC24.38■■□□□ 1.49
Lrrk2Q5S006 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
Lrrk2Q5S006 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Lrrk2Q5S006 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Lrrk2Q5S006 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Lrrk2Q5S006 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Lrrk2Q5S006 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Lrrk2Q5S006 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms