Protein–RNA interactions for Protein: Q5R1I3

Trav7-2, T cell receptor alpha variable 7-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-2Q5R1I3 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trav7-2Q5R1I3 Rab21-202ENSMUST00000218831 843 ntBASIC20.04■□□□□ 0.8
Trav7-2Q5R1I3 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Trav7-2Q5R1I3 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC20■□□□□ 0.79
Trav7-2Q5R1I3 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trav7-2Q5R1I3 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trav7-2Q5R1I3 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC19.93■□□□□ 0.78
Trav7-2Q5R1I3 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trav7-2Q5R1I3 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trav7-2Q5R1I3 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trav7-2Q5R1I3 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC19.9■□□□□ 0.78
Trav7-2Q5R1I3 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Trav7-2Q5R1I3 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trav7-2Q5R1I3 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Trav7-2Q5R1I3 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trav7-2Q5R1I3 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC19.84■□□□□ 0.77
Trav7-2Q5R1I3 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trav7-2Q5R1I3 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Trav7-2Q5R1I3 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Trav7-2Q5R1I3 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trav7-2Q5R1I3 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Trav7-2Q5R1I3 Gm25262-201ENSMUST00000174934 133 ntBASIC19.74■□□□□ 0.75
Trav7-2Q5R1I3 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC19.73■□□□□ 0.75
Trav7-2Q5R1I3 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trav7-2Q5R1I3 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trav7-2Q5R1I3 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trav7-2Q5R1I3 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trav7-2Q5R1I3 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trav7-2Q5R1I3 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC19.69■□□□□ 0.74
Trav7-2Q5R1I3 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC19.66■□□□□ 0.74
Trav7-2Q5R1I3 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trav7-2Q5R1I3 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trav7-2Q5R1I3 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Trav7-2Q5R1I3 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC19.63■□□□□ 0.73
Trav7-2Q5R1I3 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Trav7-2Q5R1I3 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trav7-2Q5R1I3 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC19.61■□□□□ 0.73
Trav7-2Q5R1I3 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trav7-2Q5R1I3 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Trav7-2Q5R1I3 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trav7-2Q5R1I3 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Trav7-2Q5R1I3 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trav7-2Q5R1I3 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trav7-2Q5R1I3 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Trav7-2Q5R1I3 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trav7-2Q5R1I3 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trav7-2Q5R1I3 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trav7-2Q5R1I3 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trav7-2Q5R1I3 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trav7-2Q5R1I3 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC19.48■□□□□ 0.71
Trav7-2Q5R1I3 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Trav7-2Q5R1I3 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trav7-2Q5R1I3 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Trav7-2Q5R1I3 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trav7-2Q5R1I3 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC19.45■□□□□ 0.7
Trav7-2Q5R1I3 Zfp131-207ENSMUST00000224946 1783 ntBASIC19.42■□□□□ 0.7
Trav7-2Q5R1I3 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC19.42■□□□□ 0.7
Trav7-2Q5R1I3 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trav7-2Q5R1I3 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trav7-2Q5R1I3 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC19.35■□□□□ 0.69
Trav7-2Q5R1I3 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC19.33■□□□□ 0.68
Trav7-2Q5R1I3 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trav7-2Q5R1I3 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Trav7-2Q5R1I3 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Trav7-2Q5R1I3 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trav7-2Q5R1I3 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trav7-2Q5R1I3 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC19.28■□□□□ 0.68
Trav7-2Q5R1I3 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC19.28■□□□□ 0.68
Trav7-2Q5R1I3 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trav7-2Q5R1I3 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trav7-2Q5R1I3 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Trav7-2Q5R1I3 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trav7-2Q5R1I3 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Trav7-2Q5R1I3 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trav7-2Q5R1I3 Zxda-201ENSMUST00000117281 2621 ntBASIC19.23■□□□□ 0.67
Trav7-2Q5R1I3 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Trav7-2Q5R1I3 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trav7-2Q5R1I3 AL845457.1-201ENSMUST00000197244 68 ntBASIC19.2■□□□□ 0.66
Trav7-2Q5R1I3 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trav7-2Q5R1I3 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trav7-2Q5R1I3 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Trav7-2Q5R1I3 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trav7-2Q5R1I3 Gm17082-201ENSMUST00000166043 1091 ntBASIC19.16■□□□□ 0.66
Trav7-2Q5R1I3 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trav7-2Q5R1I3 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trav7-2Q5R1I3 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Trav7-2Q5R1I3 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trav7-2Q5R1I3 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC19.12■□□□□ 0.65
Trav7-2Q5R1I3 Gm27322-201ENSMUST00000184007 104 ntBASIC19.12■□□□□ 0.65
Trav7-2Q5R1I3 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Trav7-2Q5R1I3 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Trav7-2Q5R1I3 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Trav7-2Q5R1I3 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Trav7-2Q5R1I3 Gm26115-201ENSMUST00000175605 87 ntBASIC19.1■□□□□ 0.65
Trav7-2Q5R1I3 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trav7-2Q5R1I3 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Trav7-2Q5R1I3 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trav7-2Q5R1I3 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Trav7-2Q5R1I3 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trav7-2Q5R1I3 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 75.2 ms