Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Rab21-202ENSMUST00000218831 843 ntBASIC33■■■□□ 2,87
Rnf20Q5DTM8 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC32,97■■■□□ 2,87
Rnf20Q5DTM8 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC32,95■■■□□ 2,87
Rnf20Q5DTM8 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC32,94■■■□□ 2,86
Rnf20Q5DTM8 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC32,93■■■□□ 2,86
Rnf20Q5DTM8 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC32,88■■■□□ 2,85
Rnf20Q5DTM8 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC32,86■■■□□ 2,85
Rnf20Q5DTM8 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC32,84■■■□□ 2,85
Rnf20Q5DTM8 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC32,82■■■□□ 2,84
Rnf20Q5DTM8 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC32,8■■■□□ 2,84
Rnf20Q5DTM8 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC32,74■■■□□ 2,83
Rnf20Q5DTM8 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC32,74■■■□□ 2,83
Rnf20Q5DTM8 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC32,73■■■□□ 2,83
Rnf20Q5DTM8 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC32,71■■■□□ 2,83
Rnf20Q5DTM8 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC32,7■■■□□ 2,83
Rnf20Q5DTM8 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC32,65■■■□□ 2,82
Rnf20Q5DTM8 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC32,61■■■□□ 2,81
Rnf20Q5DTM8 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC32,61■■■□□ 2,81
Rnf20Q5DTM8 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC32,58■■■□□ 2,81
Rnf20Q5DTM8 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC32,54■■■□□ 2,8
Rnf20Q5DTM8 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC32,52■■■□□ 2,8
Rnf20Q5DTM8 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC32,49■■■□□ 2,79
Rnf20Q5DTM8 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC32,48■■■□□ 2,79
Rnf20Q5DTM8 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC32,45■■■□□ 2,79
Rnf20Q5DTM8 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC32,45■■■□□ 2,79
Rnf20Q5DTM8 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC32,44■■■□□ 2,78
Rnf20Q5DTM8 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC32,44■■■□□ 2,78
Rnf20Q5DTM8 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC32,43■■■□□ 2,78
Rnf20Q5DTM8 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC32,43■■■□□ 2,78
Rnf20Q5DTM8 Gm25262-201ENSMUST00000174934 133 ntBASIC32,39■■■□□ 2,78
Rnf20Q5DTM8 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC32,38■■■□□ 2,77
Rnf20Q5DTM8 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC32,38■■■□□ 2,77
Rnf20Q5DTM8 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC32,36■■■□□ 2,77
Rnf20Q5DTM8 Zfp131-207ENSMUST00000224946 1783 ntBASIC32,35■■■□□ 2,77
Rnf20Q5DTM8 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC32,34■■■□□ 2,77
Rnf20Q5DTM8 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC32,32■■■□□ 2,76
Rnf20Q5DTM8 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC32,32■■■□□ 2,76
Rnf20Q5DTM8 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC32,28■■■□□ 2,76
Rnf20Q5DTM8 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC32,25■■■□□ 2,75
Rnf20Q5DTM8 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC32,23■■■□□ 2,75
Rnf20Q5DTM8 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC32,23■■■□□ 2,75
Rnf20Q5DTM8 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC32,15■■■□□ 2,74
Rnf20Q5DTM8 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC32,1■■■□□ 2,73
Rnf20Q5DTM8 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC32,09■■■□□ 2,73
Rnf20Q5DTM8 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC32,09■■■□□ 2,73
Rnf20Q5DTM8 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC32,08■■■□□ 2,73
Rnf20Q5DTM8 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC32,06■■■□□ 2,72
Rnf20Q5DTM8 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC32,05■■■□□ 2,72
Rnf20Q5DTM8 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC32,04■■■□□ 2,72
Rnf20Q5DTM8 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC31,98■■■□□ 2,71
Rnf20Q5DTM8 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC31,96■■■□□ 2,71
Rnf20Q5DTM8 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC31,95■■■□□ 2,7
Rnf20Q5DTM8 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC31,93■■■□□ 2,7
Rnf20Q5DTM8 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC31,93■■■□□ 2,7
Rnf20Q5DTM8 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC31,89■■■□□ 2,7
Rnf20Q5DTM8 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC31,88■■■□□ 2,69
Rnf20Q5DTM8 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC31,87■■■□□ 2,69
Rnf20Q5DTM8 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC31,82■■■□□ 2,68
Rnf20Q5DTM8 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC31,81■■■□□ 2,68
Rnf20Q5DTM8 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC31,8■■■□□ 2,68
Rnf20Q5DTM8 AL845457.1-201ENSMUST00000197244 68 ntBASIC31,77■■■□□ 2,68
Rnf20Q5DTM8 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC31,77■■■□□ 2,68
Rnf20Q5DTM8 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC31,76■■■□□ 2,67
Rnf20Q5DTM8 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC31,73■■■□□ 2,67
Rnf20Q5DTM8 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC31,7■■■□□ 2,67
Rnf20Q5DTM8 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC31,69■■■□□ 2,66
Rnf20Q5DTM8 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC31,69■■■□□ 2,66
Rnf20Q5DTM8 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC31,67■■■□□ 2,66
Rnf20Q5DTM8 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC31,66■■■□□ 2,66
Rnf20Q5DTM8 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC31,63■■■□□ 2,65
Rnf20Q5DTM8 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC31,62■■■□□ 2,65
Rnf20Q5DTM8 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC31,62■■■□□ 2,65
Rnf20Q5DTM8 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC31,61■■■□□ 2,65
Rnf20Q5DTM8 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC31,59■■■□□ 2,65
Rnf20Q5DTM8 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC31,57■■■□□ 2,64
Rnf20Q5DTM8 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC31,54■■■□□ 2,64
Rnf20Q5DTM8 Gm17082-201ENSMUST00000166043 1091 ntBASIC31,54■■■□□ 2,64
Rnf20Q5DTM8 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC31,54■■■□□ 2,64
Rnf20Q5DTM8 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC31,54■■■□□ 2,64
Rnf20Q5DTM8 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC31,53■■■□□ 2,64
Rnf20Q5DTM8 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC31,52■■■□□ 2,64
Rnf20Q5DTM8 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC31,52■■■□□ 2,64
Rnf20Q5DTM8 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC31,52■■■□□ 2,64
Rnf20Q5DTM8 Mipep-204ENSMUST00000225043 1548 ntBASIC31,5■■■□□ 2,63
Rnf20Q5DTM8 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC31,49■■■□□ 2,63
Rnf20Q5DTM8 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC31,49■■■□□ 2,63
Rnf20Q5DTM8 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC31,47■■■□□ 2,63
Rnf20Q5DTM8 Gm2415-204ENSMUST00000190235 2004 ntBASIC31,46■■■□□ 2,63
Rnf20Q5DTM8 Gm27322-201ENSMUST00000184007 104 ntBASIC31,46■■■□□ 2,63
Rnf20Q5DTM8 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC31,46■■■□□ 2,63
Rnf20Q5DTM8 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC31,42■■■□□ 2,62
Rnf20Q5DTM8 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC31,4■■■□□ 2,62
Rnf20Q5DTM8 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC31,4■■■□□ 2,62
Rnf20Q5DTM8 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC31,37■■■□□ 2,61
Rnf20Q5DTM8 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC31,36■■■□□ 2,61
Rnf20Q5DTM8 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC31,33■■■□□ 2,61
Rnf20Q5DTM8 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC31,29■■■□□ 2,6
Rnf20Q5DTM8 Gm26115-201ENSMUST00000175605 87 ntBASIC31,29■■■□□ 2,6
Rnf20Q5DTM8 AC166822.3-201ENSMUST00000227394 661 ntBASIC31,29■■■□□ 2,6
Rnf20Q5DTM8 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC31,28■■■□□ 2,6
Retrieved 100 of 76,532 protein–RNA pairs in 11,4 ms