Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
Rc3h1Q4VGL6 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC32.74■■■□□ 2.83
Rc3h1Q4VGL6 Gm8109-201ENSMUST00000194076 746 ntBASIC32.73■■■□□ 2.83
Rc3h1Q4VGL6 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC32.73■■■□□ 2.83
Rc3h1Q4VGL6 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC32.71■■■□□ 2.83
Rc3h1Q4VGL6 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
Rc3h1Q4VGL6 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC32.68■■■□□ 2.82
Rc3h1Q4VGL6 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC32.64■■■□□ 2.82
Rc3h1Q4VGL6 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC32.61■■■□□ 2.81
Rc3h1Q4VGL6 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
Rc3h1Q4VGL6 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
Rc3h1Q4VGL6 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC32.52■■■□□ 2.8
Rc3h1Q4VGL6 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC32.52■■■□□ 2.8
Rc3h1Q4VGL6 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC32.52■■■□□ 2.8
Rc3h1Q4VGL6 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.8
Rc3h1Q4VGL6 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
Rc3h1Q4VGL6 Gm17082-201ENSMUST00000166043 1091 ntBASIC32.42■■■□□ 2.78
Rc3h1Q4VGL6 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
Rc3h1Q4VGL6 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
Rc3h1Q4VGL6 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
Rc3h1Q4VGL6 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC32.39■■■□□ 2.78
Rc3h1Q4VGL6 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC32.35■■■□□ 2.77
Rc3h1Q4VGL6 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC32.33■■■□□ 2.77
Rc3h1Q4VGL6 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
Rc3h1Q4VGL6 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
Rc3h1Q4VGL6 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
Rc3h1Q4VGL6 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC32.2■■■□□ 2.75
Rc3h1Q4VGL6 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC32.17■■■□□ 2.74
Rc3h1Q4VGL6 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC32.17■■■□□ 2.74
Rc3h1Q4VGL6 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
Rc3h1Q4VGL6 Gm27322-201ENSMUST00000184007 104 ntBASIC32.16■■■□□ 2.74
Rc3h1Q4VGL6 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC32.09■■■□□ 2.73
Rc3h1Q4VGL6 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC32.08■■■□□ 2.73
Rc3h1Q4VGL6 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
Rc3h1Q4VGL6 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
Rc3h1Q4VGL6 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
Rc3h1Q4VGL6 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC31.95■■■□□ 2.71
Rc3h1Q4VGL6 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
Rc3h1Q4VGL6 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
Rc3h1Q4VGL6 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC31.88■■■□□ 2.69
Rc3h1Q4VGL6 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
Rc3h1Q4VGL6 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
Rc3h1Q4VGL6 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC31.85■■■□□ 2.69
Rc3h1Q4VGL6 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
Rc3h1Q4VGL6 Zfp131-207ENSMUST00000224946 1783 ntBASIC31.82■■■□□ 2.68
Rc3h1Q4VGL6 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
Rc3h1Q4VGL6 AL845457.1-201ENSMUST00000197244 68 ntBASIC31.82■■■□□ 2.68
Rc3h1Q4VGL6 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
Rc3h1Q4VGL6 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
Rc3h1Q4VGL6 Gm24804-201ENSMUST00000174982 85 ntBASIC31.72■■■□□ 2.67
Rc3h1Q4VGL6 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
Rc3h1Q4VGL6 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC31.71■■■□□ 2.67
Rc3h1Q4VGL6 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC31.7■■■□□ 2.67
Rc3h1Q4VGL6 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
Rc3h1Q4VGL6 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
Rc3h1Q4VGL6 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC31.67■■■□□ 2.66
Rc3h1Q4VGL6 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
Rc3h1Q4VGL6 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC31.66■■■□□ 2.66
Rc3h1Q4VGL6 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC31.65■■■□□ 2.66
Rc3h1Q4VGL6 AC166822.3-201ENSMUST00000227394 661 ntBASIC31.61■■■□□ 2.65
Rc3h1Q4VGL6 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC31.6■■■□□ 2.65
Rc3h1Q4VGL6 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
Rc3h1Q4VGL6 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
Rc3h1Q4VGL6 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
Rc3h1Q4VGL6 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
Rc3h1Q4VGL6 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
Rc3h1Q4VGL6 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC31.31■■■□□ 2.6
Rc3h1Q4VGL6 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
Rc3h1Q4VGL6 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC31.28■■■□□ 2.6
Rc3h1Q4VGL6 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Rc3h1Q4VGL6 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Rc3h1Q4VGL6 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC31.24■■■□□ 2.59
Rc3h1Q4VGL6 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Rc3h1Q4VGL6 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Rc3h1Q4VGL6 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Rc3h1Q4VGL6 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC31.23■■■□□ 2.59
Rc3h1Q4VGL6 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
Rc3h1Q4VGL6 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Rc3h1Q4VGL6 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
Rc3h1Q4VGL6 Mipep-204ENSMUST00000225043 1548 ntBASIC31.19■■■□□ 2.58
Rc3h1Q4VGL6 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
Rc3h1Q4VGL6 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
Rc3h1Q4VGL6 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Rc3h1Q4VGL6 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC31.17■■■□□ 2.58
Rc3h1Q4VGL6 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
Rc3h1Q4VGL6 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
Rc3h1Q4VGL6 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Rc3h1Q4VGL6 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC31.11■■■□□ 2.57
Rc3h1Q4VGL6 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
Rc3h1Q4VGL6 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
Rc3h1Q4VGL6 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
Rc3h1Q4VGL6 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
Rc3h1Q4VGL6 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
Rc3h1Q4VGL6 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC30.98■■■□□ 2.55
Rc3h1Q4VGL6 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
Rc3h1Q4VGL6 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC30.97■■■□□ 2.55
Rc3h1Q4VGL6 Peli2-204ENSMUST00000226513 1320 ntBASIC30.94■■■□□ 2.54
Rc3h1Q4VGL6 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
Rc3h1Q4VGL6 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
Rc3h1Q4VGL6 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms