Protein–RNA interactions for Protein: Q4FJU9

Tmem40, Transmembrane protein 40, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem40Q4FJU9 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Tmem40Q4FJU9 CT025624.2-201ENSMUST00000223609 1909 ntBASIC23.67■■□□□ 1.38
Tmem40Q4FJU9 Gm17082-201ENSMUST00000166043 1091 ntBASIC23.62■■□□□ 1.37
Tmem40Q4FJU9 Gm42596-201ENSMUST00000196305 1958 ntBASIC23.61■■□□□ 1.37
Tmem40Q4FJU9 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC23.59■■□□□ 1.37
Tmem40Q4FJU9 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
Tmem40Q4FJU9 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC23.57■■□□□ 1.36
Tmem40Q4FJU9 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Tmem40Q4FJU9 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
Tmem40Q4FJU9 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC23.56■■□□□ 1.36
Tmem40Q4FJU9 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC23.49■■□□□ 1.35
Tmem40Q4FJU9 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC23.48■■□□□ 1.35
Tmem40Q4FJU9 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC23.47■■□□□ 1.35
Tmem40Q4FJU9 Gm27322-201ENSMUST00000184007 104 ntBASIC23.45■■□□□ 1.34
Tmem40Q4FJU9 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC23.43■■□□□ 1.34
Tmem40Q4FJU9 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Tmem40Q4FJU9 Gm24804-201ENSMUST00000174982 85 ntBASIC23.42■■□□□ 1.34
Tmem40Q4FJU9 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Tmem40Q4FJU9 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC23.36■■□□□ 1.33
Tmem40Q4FJU9 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
Tmem40Q4FJU9 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Tmem40Q4FJU9 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
Tmem40Q4FJU9 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC23.26■■□□□ 1.31
Tmem40Q4FJU9 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Tmem40Q4FJU9 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Tmem40Q4FJU9 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
Tmem40Q4FJU9 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Tmem40Q4FJU9 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Tmem40Q4FJU9 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Tmem40Q4FJU9 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Tmem40Q4FJU9 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Tmem40Q4FJU9 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Tmem40Q4FJU9 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Tmem40Q4FJU9 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Tmem40Q4FJU9 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Tmem40Q4FJU9 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Tmem40Q4FJU9 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Tmem40Q4FJU9 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC23.09■■□□□ 1.29
Tmem40Q4FJU9 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Tmem40Q4FJU9 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Tmem40Q4FJU9 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC23.03■■□□□ 1.28
Tmem40Q4FJU9 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Tmem40Q4FJU9 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Tmem40Q4FJU9 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Tmem40Q4FJU9 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Tmem40Q4FJU9 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Tmem40Q4FJU9 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Tmem40Q4FJU9 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Tmem40Q4FJU9 Zfp131-205ENSMUST00000223812 663 ntBASIC22.94■■□□□ 1.26
Tmem40Q4FJU9 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC22.93■■□□□ 1.26
Tmem40Q4FJU9 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC22.92■■□□□ 1.26
Tmem40Q4FJU9 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC22.91■■□□□ 1.26
Tmem40Q4FJU9 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Tmem40Q4FJU9 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Tmem40Q4FJU9 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC22.87■■□□□ 1.25
Tmem40Q4FJU9 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC22.87■■□□□ 1.25
Tmem40Q4FJU9 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Tmem40Q4FJU9 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Tmem40Q4FJU9 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Tmem40Q4FJU9 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Tmem40Q4FJU9 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Tmem40Q4FJU9 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Tmem40Q4FJU9 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC22.8■■□□□ 1.24
Tmem40Q4FJU9 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC22.8■■□□□ 1.24
Tmem40Q4FJU9 AC166822.3-201ENSMUST00000227394 661 ntBASIC22.78■■□□□ 1.24
Tmem40Q4FJU9 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Tmem40Q4FJU9 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Tmem40Q4FJU9 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Tmem40Q4FJU9 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Tmem40Q4FJU9 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Tmem40Q4FJU9 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Tmem40Q4FJU9 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Tmem40Q4FJU9 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
Tmem40Q4FJU9 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC22.67■■□□□ 1.22
Tmem40Q4FJU9 AL845457.1-201ENSMUST00000197244 68 ntBASIC22.67■■□□□ 1.22
Tmem40Q4FJU9 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Tmem40Q4FJU9 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Tmem40Q4FJU9 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC22.64■■□□□ 1.22
Tmem40Q4FJU9 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Tmem40Q4FJU9 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC22.6■■□□□ 1.21
Tmem40Q4FJU9 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Tmem40Q4FJU9 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Tmem40Q4FJU9 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Tmem40Q4FJU9 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Tmem40Q4FJU9 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Tmem40Q4FJU9 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Tmem40Q4FJU9 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Tmem40Q4FJU9 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
Tmem40Q4FJU9 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC22.53■■□□□ 1.2
Tmem40Q4FJU9 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Tmem40Q4FJU9 Gm16148-201ENSMUST00000119653 893 ntBASIC22.47■■□□□ 1.19
Tmem40Q4FJU9 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Tmem40Q4FJU9 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Tmem40Q4FJU9 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Tmem40Q4FJU9 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
Tmem40Q4FJU9 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Tmem40Q4FJU9 Zfp131-207ENSMUST00000224946 1783 ntBASIC22.42■■□□□ 1.18
Tmem40Q4FJU9 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
Tmem40Q4FJU9 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Tmem40Q4FJU9 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Retrieved 100 of 76,532 protein–RNA pairs in 11.4 ms